Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 BNIP3P8-201ENST00000597863 560 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 ADAM3A-203ENST00000461344 2157 ntBASIC4.96□□□□□ -1.62
SHROOM4Q9ULL8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-799P-201ENST00000363567 107 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 RAC1P6-201ENST00000423911 575 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 FCF1P1-201ENST00000432690 571 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AL135752.1-201ENST00000479477 471 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AP000867.2-201ENST00000532468 320 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC112191.3-201ENST00000604371 277 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC091953.2-201ENST00000623979 160 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 AC103988.1-201ENST00000566382 2177 ntBASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM4Q9ULL8 SNORD62.1-201ENST00000362541 86 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RNY4P16-201ENST00000364768 94 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RNU2-33P-201ENST00000410344 192 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 IGHV3-76-201ENST00000522465 295 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AC006338.1-201ENST00000618453 749 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-140P-201ENST00000384566 108 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 SNORA26.8-201ENST00000391306 124 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AC119618.1-201ENST00000434191 222 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RNA5SP269-201ENST00000459032 137 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RPL21P99-201ENST00000480369 423 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 MTND4LP22-201ENST00000508209 276 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 RPL21P5-201ENST00000554662 472 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 MIR3974-201ENST00000637126 96 ntBASIC4.94□□□□□ -1.62
SHROOM4Q9ULL8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-217P-201ENST00000384164 104 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 BTF3L4P3-201ENST00000418879 476 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 RPS15AP12-201ENST00000419498 388 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC090960.1-201ENST00000421072 306 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC098826.1-201ENST00000433943 471 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC129850.1-201ENST00000436203 508 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 ARPC3P1-201ENST00000437218 533 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 snoU109.1-201ENST00000459339 135 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC010486.3-201ENST00000511602 785 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 RNA5SP290-201ENST00000517133 127 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AP003467.2-201ENST00000520175 319 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC087373.1-201ENST00000524920 491 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 FTX_3.1-201ENST00000610451 147 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 AC092140.2-201ENST00000618027 521 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM4Q9ULL8 Y_RNA.245-201ENST00000364493 95 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-701P-201ENST00000384059 107 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 ZNF863P-201ENST00000426746 417 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 MTATP6P30-201ENST00000443540 664 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AL033528.1-201ENST00000453780 140 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 RPS27P29-201ENST00000463110 252 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 MTND4LP3-201ENST00000468320 276 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 RPS3AP4-201ENST00000555161 764 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AL133393.1-201ENST00000603277 287 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AC103810.6-201ENST00000606708 136 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 AC108747.1-201ENST00000609508 535 ntBASIC4.92□□□□□ -1.62
SHROOM4Q9ULL8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-198P-201ENST00000384258 104 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 RNY3P10-201ENST00000384764 102 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AL589872.1-201ENST00000426602 288 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 COX6CP2-201ENST00000444980 225 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 RPL23AP14-201ENST00000468281 468 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC010587.1-201ENST00000505809 469 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms