Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC010900.2-201ENST00000604508 210 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 Y_RNA.143-201ENST00000363520 106 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1286P-201ENST00000383871 107 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RNU6-217P-201ENST00000384164 104 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 Y_RNA.462-201ENST00000384268 102 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 MIR607-201ENST00000385241 96 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RNU2-14P-201ENST00000411053 191 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC068287.1-201ENST00000430283 295 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC009296.1-201ENST00000443146 155 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AURKAPS2-201ENST00000454983 333 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 snoU13.20-201ENST00000459180 104 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RPL23AP75-201ENST00000491601 451 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 UBE2CP3-201ENST00000502715 450 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 OR7H2P-201ENST00000513483 306 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC008033.2-201ENST00000542626 177 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC130289.1-201ENST00000577321 73 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AL356157.2-201ENST00000605122 111 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RPL23AP88-201ENST00000605759 454 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 FTX_3.1-201ENST00000610451 147 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 FTX_2.1-201ENST00000618816 94 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AL450472.1-202ENST00000637286 180 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 U2.21-201ENST00000637295 81 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AC241585.2-209ENST00000638217 143 ntBASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FOXD3Q9UJU5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 FTLP6-201ENST00000355274 422 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 RNU1-108P-201ENST00000362556 161 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 Y_RNA.180-201ENST00000363867 113 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 Z98749.2-208ENST00000381646 500 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 MIR518D-201ENST00000385014 87 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AL079342.1-201ENST00000401460 267 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 MIR548M-201ENST00000408260 86 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1245P-201ENST00000411130 106 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AL512844.2-201ENST00000433990 593 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 Z82188.1-201ENST00000436709 154 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 RPL37P4-201ENST00000448908 268 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AL136097.1-201ENST00000456945 913 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 PRELID3BP1-201ENST00000457142 540 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 U8.22-201ENST00000459141 133 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AC023141.12-201ENST00000512399 199 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AC016256.1-201ENST00000547971 354 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 AC010928.2-201ENST00000588017 287 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXD3Q9UJU5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
FOXD3Q9UJU5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
FOXD3Q9UJU5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXD3Q9UJU5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXD3Q9UJU5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
FOXD3Q9UJU5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXD3Q9UJU5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms