Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP001646.1-201ENST00000527936 915 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 SYF2P1-201ENST00000550658 413 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AF038458.1-201ENST00000588406 262 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 SNHG22-203ENST00000617833 660 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 AC093648.1-201ENST00000623546 606 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 ZNF826P-207ENST00000622273 1910 ntBASIC3.24□□□□□ -1.89
SIX4Q9UIU6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX4Q9UIU6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 Y_RNA.573-201ENST00000384763 105 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RPL30P16-201ENST00000419341 429 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC018630.2-202ENST00000422992 927 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RPL21P66-201ENST00000426566 466 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 NEK4P1-201ENST00000433383 879 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC024082.2-201ENST00000434771 238 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RPL26P6-201ENST00000440913 438 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC016691.1-201ENST00000441321 413 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AL121871.1-201ENST00000443413 436 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 CACYBPP2-201ENST00000453625 678 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RPS29P2-201ENST00000479278 136 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 RPS29P25-201ENST00000481709 171 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC100870.1-201ENST00000522035 505 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC109635.4-202ENST00000531666 412 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AP002404.1-201ENST00000532005 451 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC008752.3-201ENST00000588113 712 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AL162413.1-201ENST00000603198 110 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AL020991.1-201ENST00000612314 373 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 YWHAEP7-203ENST00000622054 312 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC099654.14-201ENST00000638599 341 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC010733.2-201ENST00000589496 5702 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AC009812.4-201ENST00000569134 1805 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX4Q9UIU6 AL035425.3-201ENST00000564206 4996 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
SIX4Q9UIU6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-877P-201ENST00000383868 107 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 SNORA69-201ENST00000383895 132 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-76P-201ENST00000384060 104 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 SNORA44-201ENST00000384584 132 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU2-39P-201ENST00000410604 198 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AL109913.1-201ENST00000421173 514 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RPL35AP12-201ENST00000425362 338 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 MTCO1P39-201ENST00000426148 480 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 MTATP6P4-201ENST00000427725 675 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU7-63P-201ENST00000459054 62 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC006512.1-201ENST00000468816 291 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 HMGB3P15-201ENST00000507326 574 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 KLHL2P1-201ENST00000508691 521 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AL163153.1-201ENST00000554223 283 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC012443.1-201ENST00000605605 231 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 FER-210ENST00000628534 558 ntTSL 5 BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 MIR3662-201ENST00000637030 95 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 TAB3P1-202ENST00000452645 1634 ntBASIC3.22□□□□□ -1.89
SIX4Q9UIU6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX4Q9UIU6 AC004925.1-201ENST00000624256 2706 ntBASIC3.21□□□□□ -1.89
SIX4Q9UIU6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
SIX4Q9UIU6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms