Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC090115.4-201ENST00000609970 188 ntBASIC3.24□□□□□ -1.89
LIMA1Q9UHB6 Z99129.1-201ENST00000612510 255 ntBASIC3.24□□□□□ -1.89
LIMA1Q9UHB6 AC138649.3-201ENST00000622154 254 ntBASIC3.24□□□□□ -1.89
LIMA1Q9UHB6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 SNORA24.1-201ENST00000384401 135 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 RNU6-456P-201ENST00000384493 107 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 RN7SKP123-201ENST00000410732 291 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AL109913.1-201ENST00000421173 514 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC010975.2-201ENST00000427781 588 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 RPL36AP53-201ENST00000432891 316 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC126389.1-201ENST00000477436 290 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC233702.1-201ENST00000482905 502 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AL358832.1-201ENST00000497800 389 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC116562.3-201ENST00000506136 177 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC068587.5-201ENST00000528506 175 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC022880.1-201ENST00000534017 973 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AL391261.3-201ENST00000557194 520 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC009063.1-201ENST00000563342 702 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 MTCO3P24-201ENST00000572729 782 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 BNIP3P9-201ENST00000603714 553 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC069234.5-201ENST00000611056 416 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 AC013562.2-201ENST00000611632 603 ntBASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMA1Q9UHB6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 SNORA63.1-201ENST00000362493 131 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 RNU6-179P-201ENST00000363350 107 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 RNU6-74P-201ENST00000384235 107 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 MIR888-201ENST00000401186 77 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC006028.1-201ENST00000438379 402 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AL714022.1-201ENST00000439897 151 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 VN1R34P-201ENST00000447387 883 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC132479.1-201ENST00000449160 144 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC091133.4-201ENST00000511142 308 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 SUB1P2-201ENST00000556401 297 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC078795.2-201ENST00000602835 1252 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC008739.3-201ENST00000603262 127 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC010338.1-201ENST00000621823 717 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 AC093648.1-201ENST00000623546 606 ntBASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMA1Q9UHB6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 RPL9P7-201ENST00000330965 580 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 RNU6-884P-201ENST00000363889 107 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 MIR1-2-201ENST00000384961 85 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 AC080125.1-201ENST00000414888 684 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 OR2B8P-201ENST00000432841 938 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 AC104472.2-201ENST00000469035 601 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 AC023194.1-201ENST00000493084 308 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 MTND2P33-201ENST00000506452 1031 ntBASIC3.21□□□□□ -1.9
LIMA1Q9UHB6 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms