Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AL360157.1-201ENST00000565962 87 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 MIR5684-201ENST00000585074 65 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AC124303.1-201ENST00000605703 360 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AL359757.2-201ENST00000624309 274 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 U6.98-201ENST00000637157 84 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
VSX1Q9NZR4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MIR607-201ENST00000385241 96 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RPS4XP7-201ENST00000406274 780 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RNU6-607P-201ENST00000411283 108 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC016769.2-201ENST00000414815 475 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL451062.2-201ENST00000427515 271 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC079780.1-201ENST00000428259 207 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 HSPD1P21-201ENST00000436541 245 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL049874.1-201ENST00000489560 388 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC116337.1-201ENST00000509680 687 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC096745.1-201ENST00000509945 370 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MIR4277-201ENST00000578298 84 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MIR3171-201ENST00000584270 74 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 SNRPGP17-201ENST00000603780 214 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC098826.3-201ENST00000603823 466 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 DUSP12P1-201ENST00000612874 516 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL355365.1-201ENST00000616480 294 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MIR3653-201ENST00000625572 110 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AP001148.1-201ENST00000624124 2359 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AL359693.1-201ENST00000614959 2407 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 OR4G2P-202ENST00000641004 1759 ntBASIC3.63□□□□□ -1.83
VSX1Q9NZR4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX1Q9NZR4 AC008568.2-201ENST00000623862 2313 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 ZNF285B-201ENST00000561698 1767 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 SNORA60-201ENST00000362396 134 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC117470.1-201ENST00000381974 330 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 RNU4-14P-201ENST00000410858 122 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC245054.2-201ENST00000415639 319 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL353621.1-201ENST00000418219 243 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC091167.1-201ENST00000492017 396 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC002456.2-201ENST00000509356 380 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 TBCAP3-201ENST00000512475 312 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC023442.1-201ENST00000531247 422 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL161798.1-201ENST00000604630 131 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AC114781.5-201ENST00000615297 108 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PISRT1.1-201ENST00000616930 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms