Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CIR1P3-201ENST00000405137 479 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2□□□□□ -2.09
TREX1Q9NSU2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2□□□□□ -2.09
TREX1Q9NSU2 Z98742.2-201ENST00000431564 187 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC010153.1-201ENST00000432862 727 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
TREX1Q9NSU2 AC124916.1-201ENST00000444020 547 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 CECR9-201ENST00000453421 199 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AC005410.1-202ENST00000460347 485 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC008481.1-201ENST00000463278 396 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC098591.2-201ENST00000510152 315 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC110760.3-202ENST00000515177 371 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AC023538.1-201ENST00000534576 736 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2□□□□□ -2.09
TREX1Q9NSU2 MIR3199-1-201ENST00000582434 88 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2□□□□□ -2.09
TREX1Q9NSU2 AC112204.3-201ENST00000623822 332 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 AC099654.8-201ENST00000637757 681 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
TREX1Q9NSU2 ELF2P3-201ENST00000445099 1506 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 SNORD116.1-201ENST00000365628 92 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 SNORA51.11-201ENST00000384442 131 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 CCNG1P1-201ENST00000406783 885 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL355143.1-201ENST00000407101 841 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 RNU6-1328P-201ENST00000410938 106 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 MTCO1P17-201ENST00000411522 491 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 RPL21P24-201ENST00000413752 448 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 RPS3AP37-201ENST00000419176 745 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 BPY2DP-201ENST00000422208 265 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL035407.1-201ENST00000429211 571 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL139415.2-201ENST00000431968 163 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 FAM103A2P-201ENST00000444122 354 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 RPL21P134-201ENST00000453468 483 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL121769.1-201ENST00000469473 401 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC010631.1-201ENST00000474150 156 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 RPS27AP10-201ENST00000496103 208 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 MTCO2P15-201ENST00000532655 656 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL359212.1-201ENST00000556608 614 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 MTCYBP23-201ENST00000558717 1102 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC090079.2-201ENST00000575289 768 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC007229.1-201ENST00000590455 412 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 MTND3P19-201ENST00000603825 345 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC018645.2-201ENST00000609151 472 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AP002791.1-201ENST00000623291 381 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 PCMTD1P7-201ENST00000634506 357 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AC010889.1-201ENST00000566193 2666 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 AL109809.4-201ENST00000603520 2185 ntBASIC1.99□□□□□ -2.09
TREX1Q9NSU2 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 RNU5E-10P-201ENST00000363506 118 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 SNORA46.1-201ENST00000391069 153 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 MTATP6P20-201ENST00000414147 562 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AP000542.1-201ENST00000448473 371 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC022493.1-201ENST00000492984 337 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC034222.1-201ENST00000494052 532 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC106872.3-201ENST00000495104 446 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC026801.1-201ENST00000497178 464 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC021146.8-201ENST00000507455 733 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC093281.2-201ENST00000510153 597 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
TREX1Q9NSU2 AC023813.2-201ENST00000564321 469 ntBASIC1.98□□□□□ -2.09
TREX1Q9NSU2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms