Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AC245166.1-201ENST00000521012 253 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 MIR7851-201ENST00000610611 160 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AL359880.1-201ENST00000621879 266 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AC017071.1-201ENST00000564407 2204 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 Y_RNA.33-201ENST00000362591 102 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AL359837.1-201ENST00000381357 287 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AL139039.1-201ENST00000401900 692 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP111-201ENST00000411386 101 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 NDUFS5P4-201ENST00000412983 318 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 Z99755.1-201ENST00000414048 380 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC016769.2-201ENST00000414815 475 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AL035423.1-201ENST00000420331 213 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AL353729.1-201ENST00000425044 720 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 MTCO3P30-201ENST00000426425 670 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC005300.1-201ENST00000428401 373 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 GTF2IP20-201ENST00000431663 360 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC000111.3-201ENST00000433478 193 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AL596276.1-201ENST00000434465 418 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 BRK1P2-201ENST00000442875 223 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 RPL23AP20-201ENST00000447965 421 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 MTATP6P7-201ENST00000453315 681 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AP005435.4-201ENST00000529514 284 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AP003034.1-201ENST00000534621 422 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 MIR4703-201ENST00000577728 79 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 MTATP6P3-201ENST00000581686 676 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AP001330.5-201ENST00000607176 411 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC092954.2-201ENST00000609103 430 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC004852.3-201ENST00000614131 326 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC083809.1-201ENST00000615051 472 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC073534.2-201ENST00000620377 381 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC002064.3-201ENST00000623448 346 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC139792.3-201ENST00000623525 224 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC090617.7-201ENST00000623952 126 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP1AQ9HD42 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1287P-201ENST00000362914 107 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-371P-201ENST00000364283 108 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP51-201ENST00000364750 119 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 Z98749.2-208ENST00000381646 500 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-116P-201ENST00000384042 109 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 Y_RNA.516-201ENST00000384541 124 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-658P-201ENST00000384606 106 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1060P-201ENST00000384664 107 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 MIR578-201ENST00000384828 96 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AL445189.1-201ENST00000405722 338 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 ATP5A1P2-201ENST00000412323 255 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 DBIP2-201ENST00000419076 262 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC009414.1-201ENST00000427200 443 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AL606489.2-201ENST00000433886 234 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC104058.1-201ENST00000448028 297 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 MTND1P18-201ENST00000448191 573 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 PSPHP1-201ENST00000450062 261 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 SNORD105B-201ENST00000458770 79 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RPL21P41-201ENST00000459863 264 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 EIF4EP3-201ENST00000498782 656 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RAC1P5-201ENST00000512182 576 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RN7SKP18-201ENST00000516005 275 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RNU6-506P-201ENST00000516553 94 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms