Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 DLGAP5P1-201ENST00000430307 464 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RPS24P13-201ENST00000442520 397 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 MTCYBP1-201ENST00000454315 1119 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC096576.1-201ENST00000489014 359 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC097462.2-201ENST00000504623 481 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AP000867.2-201ENST00000532468 320 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 BNIP3P9-201ENST00000603714 553 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC087241.4-201ENST00000612441 480 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AL359547.2-201ENST00000615810 418 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC005609.4-201ENST00000625071 447 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 MTND5P26-201ENST00000426018 1752 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 FTLP6-201ENST00000355274 422 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-179P-201ENST00000363350 107 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 SNORA80A-201ENST00000363922 136 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC093106.2-201ENST00000428212 385 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC073464.1-201ENST00000429823 534 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 RPL23AP30-201ENST00000432419 501 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AL591212.2-201ENST00000433923 257 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 MTATP6P16-201ENST00000434543 526 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 SNRPEP9-201ENST00000436794 238 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC093899.1-201ENST00000457984 376 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 RN7SL283P-201ENST00000489055 303 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC006445.1-201ENST00000491925 405 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AP001646.1-201ENST00000527936 915 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 OR5B19P-201ENST00000531766 928 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC024619.4-201ENST00000580924 316 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC078795.2-201ENST00000602835 1252 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AL162713.1-201ENST00000604480 262 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AL022154.1-201ENST00000604698 785 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AC022893.3-201ENST00000607665 437 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AP001486.3-201ENST00000615334 372 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AP003122.6-201ENST00000623831 495 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 LRRC77P-213ENST00000637727 880 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
POLR1BQ9H9Y6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-512P-201ENST00000364438 103 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 MIR301A-201ENST00000385261 86 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 MIR454-201ENST00000390180 115 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 SAR1AP2-201ENST00000392696 594 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 RPL5P18-201ENST00000406671 891 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AC099548.1-201ENST00000421443 426 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 DNAJC19P4-201ENST00000440115 345 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AC079382.1-201ENST00000493346 557 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AC108078.2-201ENST00000510750 236 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AC010265.1-201ENST00000513509 211 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 OR4R1P-201ENST00000529879 463 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL359212.1-201ENST00000556608 614 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL121992.2-201ENST00000606262 256 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 AL359740.1-201ENST00000624340 592 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 API5P2-201ENST00000397055 1498 ntBASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
POLR1BQ9H9Y6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-1120P-201ENST00000362988 108 ntBASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-288P-201ENST00000363690 104 ntBASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 Y_RNA.367-201ENST00000365544 101 ntBASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
POLR1BQ9H9Y6 SNORA24.1-201ENST00000384401 135 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms