Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNA5SP291-201ENST00000517222 105 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AC098826.3-201ENST00000603823 466 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AL161798.1-201ENST00000604630 131 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AC005046.1-201ENST00000608515 625 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AC107871.2-201ENST00000612894 502 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AC008250.2-201ENST00000615261 205 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AC007998.5-201ENST00000622938 237 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 FAM35BP-202ENST00000497389 3337 ntBASIC2.91□□□□□ -1.94
SNX25Q9H3E2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX25Q9H3E2 AP003122.5-201ENST00000527668 3766 ntBASIC2.9□□□□□ -1.94
SNX25Q9H3E2 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL21P75-201ENST00000396599 483 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL21P28-201ENST00000401418 483 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AL592114.1-201ENST00000403842 483 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 ZNF863P-201ENST00000426746 417 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC119618.1-201ENST00000434191 222 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC104850.1-201ENST00000435940 476 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL12P25-201ENST00000455592 494 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL21P39-201ENST00000463605 483 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC104472.2-201ENST00000469035 601 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL21P93-201ENST00000480465 489 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC233702.1-201ENST00000482905 502 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC087190.1-201ENST00000484462 480 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC093591.1-201ENST00000491435 481 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RPL21P16-201ENST00000495531 483 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC138853.1-201ENST00000503549 823 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 Y_RNA.695-201ENST00000516715 107 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 RNU6-1092P-201ENST00000516955 87 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 MIR4319-201ENST00000577285 85 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 MIR3167-201ENST00000579623 85 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC073544.2-201ENST00000601155 540 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 NUTF2P8-201ENST00000604593 363 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AP001506.1-201ENST00000615444 211 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 AP003122.6-201ENST00000623831 495 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
SNX25Q9H3E2 TEX21P-201ENST00000447107 1476 ntBASIC2.9□□□□□ -1.95
SNX25Q9H3E2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 UBE2L2-201ENST00000254302 429 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 Y_RNA.77-201ENST00000362962 107 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 RNU6-960P-201ENST00000364056 120 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 SNORD116-9-201ENST00000384000 95 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 SNORD116-3-201ENST00000384287 95 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 RNU6-39P-201ENST00000384344 107 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 SNORD116-7-201ENST00000384404 95 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 SNORD116-5-201ENST00000384462 95 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 ISCA1P1-201ENST00000426679 387 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC063976.3-201ENST00000426849 329 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AL365496.1-201ENST00000426885 215 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 NEFMP1-201ENST00000443423 1006 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 USP9YP29-201ENST00000445112 563 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 MTATP6P26-201ENST00000445926 662 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 CECR9-201ENST00000453421 199 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 snoU109.1-201ENST00000459339 135 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 RN7SL432P-201ENST00000484057 298 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 RNA5SP290-201ENST00000517133 127 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC022616.3-201ENST00000523940 148 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC011979.2-201ENST00000527568 352 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
SNX25Q9H3E2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX25Q9H3E2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms