Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AL139811.1-201ENST00000424779 2299 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 RNA5SP46-201ENST00000362370 120 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 RNU6-1141P-201ENST00000364520 107 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 RNY4P18-201ENST00000391107 89 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 ELOCP21-201ENST00000412558 336 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 BMS1P17-202ENST00000416720 316 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC074117.2-201ENST00000417130 397 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC244098.2-201ENST00000422068 99 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC064862.4-201ENST00000442180 334 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AP000705.1-201ENST00000454567 350 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC011276.1-201ENST00000469688 323 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AL136038.1-201ENST00000497246 351 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC024614.2-201ENST00000577584 372 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 RN7SL753P-201ENST00000581238 290 ntBASIC5.11□□□□□ -1.59
USB1Q9BQ65 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USB1Q9BQ65 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USB1Q9BQ65 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC118273.1-201ENST00000525324 3006 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 RNU6-1285P-201ENST00000363480 105 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 RNA5SP234-201ENST00000363916 119 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 Y_RNA.563-201ENST00000384707 108 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 RN7SKP61-201ENST00000410642 295 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC009237.8-201ENST00000445492 379 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC022404.1-201ENST00000555320 273 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC021231.3-201ENST00000558497 370 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC090877.1-201ENST00000561418 344 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 MIR132-201ENST00000591554 101 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AL670379.2-201ENST00000604983 252 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC090607.5-201ENST00000615692 224 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.1□□□□□ -1.59
USB1Q9BQ65 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USB1Q9BQ65 SMG1P4-204ENST00000523028 4131 ntBASIC5.1□□□□□ -1.59
USB1Q9BQ65 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 RNA5SP500-201ENST00000364486 119 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 RNU6-793P-201ENST00000384233 104 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 SNORD37.2-201ENST00000391075 66 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 U3.22-201ENST00000391120 215 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 RNU6-1064P-201ENST00000410626 104 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 RN7SKP53-201ENST00000411337 315 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 PPIAP20-201ENST00000449839 135 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 EEF1B2P7-201ENST00000451177 676 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 AC100832.1-201ENST00000471945 383 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 RN7SL174P-201ENST00000475578 289 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 SNORA70.16-201ENST00000516390 95 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 RNU1-103P-201ENST00000516502 125 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 AC006380.1-201ENST00000603598 186 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 AL078604.3-201ENST00000615580 211 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 MIR3674-201ENST00000636576 68 ntBASIC5.09□□□□□ -1.59
USB1Q9BQ65 MIR4679-1-201ENST00000637619 75 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms