Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC108032.1-201ENST00000416706 207 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RPL7P2-201ENST00000427639 268 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RPL23AP89-201ENST00000439324 255 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RPS29P7-201ENST00000439662 171 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC005094.1-201ENST00000440420 368 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 MTND5P30-201ENST00000452896 1731 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 HMGN2P16-201ENST00000456802 261 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RPL36AP13-201ENST00000457490 317 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 TRBV1-201ENST00000476502 284 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 VN1R105P-201ENST00000486595 910 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC104806.1-201ENST00000508720 308 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC008526.1-201ENST00000509149 338 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RNU6-189P-201ENST00000516120 101 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 SNORA67.7-201ENST00000516664 135 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC126177.3-201ENST00000551839 688 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AL161670.1-201ENST00000554348 137 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC010653.1-201ENST00000571108 881 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 MIR3186-201ENST00000577404 85 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC053481.4-201ENST00000583164 216 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 MIR4293-201ENST00000584305 78 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 NUTF2P8-201ENST00000604593 363 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC012443.1-201ENST00000605605 231 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AL138726.1-201ENST00000614873 333 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC007485.1-201ENST00000616755 206 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AC006133.1-201ENST00000617106 264 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RNU6-593P-201ENST00000364716 112 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RNU6-550P-201ENST00000391057 101 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 U3.29-201ENST00000391296 212 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 SOD2P1-201ENST00000396543 562 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RNA5SP129-201ENST00000410276 118 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RNA5SP107-201ENST00000411358 122 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 CYCSP19-201ENST00000411715 316 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RPL21P109-201ENST00000422213 475 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 SNORA71B-202ENST00000439232 272 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 Z98949.2-201ENST00000440996 144 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RPS17P13-201ENST00000448974 407 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RPS15AP27-201ENST00000449183 343 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 RPL12P25-201ENST00000455592 494 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 SNORA25.10-201ENST00000515926 124 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 MIR3158-1-201ENST00000583596 81 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 MIR432-201ENST00000606207 94 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AL355365.1-201ENST00000616480 294 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AL162373.1-201ENST00000620433 407 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 MIR7702-201ENST00000621931 59 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AC092628.2-201ENST00000622492 339 ntBASIC3.39□□□□□ -1.87
ZNF48Q96MX3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms