Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 NANOGP2-201ENST00000435391 727 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 Z82210.1-201ENST00000440037 231 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.41□□□□□ -2.02
USP47Q96K76 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.41□□□□□ -2.02
USP47Q96K76 AC021382.1-201ENST00000483523 359 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 RPS15AP34-201ENST00000487776 387 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.41□□□□□ -2.02
USP47Q96K76 SUMO2P6-201ENST00000505273 288 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC022447.3-201ENST00000506865 495 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 MRPS36P2-201ENST00000512569 299 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.41□□□□□ -2.02
USP47Q96K76 CBX3P4-201ENST00000538909 354 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
USP47Q96K76 GLYCAM1-201ENST00000546596 285 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.41□□□□□ -2.02
USP47Q96K76 CYCSP2-201ENST00000558168 301 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC104581.2-201ENST00000572227 430 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 MIR4448-201ENST00000584360 86 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AL355877.2-201ENST00000603670 358 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC079395.3-201ENST00000615161 484 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC019226.1-201ENST00000625666 515 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP47Q96K76 AL138713.1-201ENST00000624026 2130 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USP47Q96K76 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.4□□□□□ -2.02
USP47Q96K76 RNU6-217P-201ENST00000384164 104 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 MIR499A-201ENST00000384903 122 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 RPL23AP29-201ENST00000397284 453 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USP47Q96K76 HMGN2P19-201ENST00000425149 265 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.02
USP47Q96K76 GTF2IP20-201ENST00000431663 360 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USP47Q96K76 HMGB1P36-201ENST00000487709 576 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AC096571.1-202ENST00000506634 735 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.4□□□□□ -2.02
USP47Q96K76 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 NRON-201ENST00000517270 370 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.4□□□□□ -2.02
USP47Q96K76 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USP47Q96K76 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USP47Q96K76 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.4□□□□□ -2.02
USP47Q96K76 AL391261.3-201ENST00000557194 520 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.4□□□□□ -2.02
USP47Q96K76 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 HMGN2P15-201ENST00000585707 270 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 OR1M4P-201ENST00000589199 287 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.02
USP47Q96K76 AL161729.4-201ENST00000604650 476 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AL139344.1-201ENST00000605228 195 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AL121895.2-201ENST00000619558 447 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 AC012150.2-201ENST00000621300 544 ntBASIC2.4□□□□□ -2.02
USP47Q96K76 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.4□□□□□ -2.02
USP47Q96K76 DDX10P1-201ENST00000448545 1933 ntBASIC2.4□□□□□ -2.03
USP47Q96K76 AC131280.1-202ENST00000624067 4211 ntBASIC2.4□□□□□ -2.03
USP47Q96K76 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.39□□□□□ -2.03
USP47Q96K76 RNU6-289P-201ENST00000364093 107 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 Y_RNA.311-201ENST00000365068 96 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 RNU6-741P-201ENST00000383889 107 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 RNU6-413P-201ENST00000384115 107 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 RNU6-140P-201ENST00000384566 108 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 MIR1284-201ENST00000408337 120 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.39□□□□□ -2.03
USP47Q96K76 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.39□□□□□ -2.03
USP47Q96K76 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.39□□□□□ -2.03
USP47Q96K76 FGF7P5-201ENST00000441829 291 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.39□□□□□ -2.03
USP47Q96K76 AC007327.1-201ENST00000447461 264 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 ZNF886P-201ENST00000450781 723 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 MTND1P16-201ENST00000465177 898 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 MRPS17P3-201ENST00000465453 385 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 AC104563.1-201ENST00000476147 376 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 TRMT112P2-201ENST00000512910 132 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.39□□□□□ -2.03
USP47Q96K76 RN7SKP40-201ENST00000517211 242 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 AC090079.2-201ENST00000575289 768 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 MTND4LP5-201ENST00000605152 292 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 AC009268.2-201ENST00000621925 457 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 MTND1P37-201ENST00000636562 264 ntBASIC2.39□□□□□ -2.03
USP47Q96K76 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.39□□□□□ -2.03
USP47Q96K76 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP47Q96K76 RNU6-754P-201ENST00000391166 107 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 TXNP7-201ENST00000406296 293 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 RNU2-25P-201ENST00000411041 191 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.38□□□□□ -2.03
USP47Q96K76 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.38□□□□□ -2.03
USP47Q96K76 AL953862.1-201ENST00000423016 168 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.38□□□□□ -2.03
USP47Q96K76 RPS15AP7-201ENST00000439294 405 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 TAF9P1-201ENST00000445421 515 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 MTND1P9-201ENST00000453775 944 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 TAF9P2-201ENST00000454958 515 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 MEMO1P3-201ENST00000459811 302 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.38□□□□□ -2.03
USP47Q96K76 RN7SL274P-201ENST00000492268 272 ntBASIC2.38□□□□□ -2.03
USP47Q96K76 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.38□□□□□ -2.03
USP47Q96K76 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.38□□□□□ -2.03
USP47Q96K76 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms