Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 MIR888-201ENST00000401186 77 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 RNU2-66P-201ENST00000410650 161 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AL109913.1-201ENST00000421173 514 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4□□□□□ -1.77
CCDC136Q96JN2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4□□□□□ -1.77
CCDC136Q96JN2 SAR1AP4-201ENST00000429225 591 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 RPL21P2-201ENST00000440049 481 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4□□□□□ -1.77
CCDC136Q96JN2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC136Q96JN2 Z96811.1-201ENST00000445880 108 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 RPL26P9-201ENST00000457466 433 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC126182.1-201ENST00000478134 357 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 RPL21P13-201ENST00000488305 481 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AL358832.1-201ENST00000497800 389 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 HSPD1P15-201ENST00000505573 1122 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC009901.1-201ENST00000506703 541 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 RBBP4P6-201ENST00000508098 202 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 RAC1P5-201ENST00000512182 576 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4□□□□□ -1.77
CCDC136Q96JN2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4□□□□□ -1.77
CCDC136Q96JN2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC136Q96JN2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4□□□□□ -1.77
CCDC136Q96JN2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4□□□□□ -1.77
CCDC136Q96JN2 MIR2682-201ENST00000580305 110 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 MIR15A-201ENST00000607334 83 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC069234.5-201ENST00000611056 416 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AL359198.2-201ENST00000611836 194 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 AC012409.4-201ENST00000612923 249 ntBASIC4□□□□□ -1.77
CCDC136Q96JN2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC136Q96JN2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4□□□□□ -1.77
CCDC136Q96JN2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 RNU6-108P-201ENST00000365558 107 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 SNORA4.3-201ENST00000365564 137 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 RNA5SP171-201ENST00000391071 115 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC079781.2-201ENST00000446424 169 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 MTCO2P7-201ENST00000446518 666 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 NANOGNBP1-201ENST00000448444 480 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 MRPS17P3-201ENST00000465453 385 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC126389.1-201ENST00000477436 290 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 RPL36AP51-201ENST00000487216 318 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AP000787.2-201ENST00000604432 568 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 RPL23AP88-201ENST00000605759 454 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC136475.10-201ENST00000620253 385 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC025034.2-201ENST00000623264 286 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AC002064.3-201ENST00000623448 346 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 AL157786.1-207ENST00000627771 695 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 U2.21-201ENST00000637295 81 ntBASIC3.99□□□□□ -1.77
CCDC136Q96JN2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC136Q96JN2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AL359693.1-201ENST00000614959 2407 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RNU6-179P-201ENST00000363350 107 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 Y_RNA.582-201ENST00000391023 95 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 CISD1P1-201ENST00000393907 327 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 UBE2V1P2-201ENST00000397758 440 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RNU2-16P-201ENST00000410712 136 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RNU2-25P-201ENST00000411041 191 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AL451074.3-201ENST00000437709 472 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AC132479.1-201ENST00000449160 144 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RPS3AP17-201ENST00000472594 777 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AP004217.1-201ENST00000480579 346 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RNU1-103P-201ENST00000516502 125 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 RNU6-143P-201ENST00000516942 93 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AP003122.3-201ENST00000526316 255 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AP003072.2-201ENST00000527756 676 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AC084851.1-201ENST00000529105 249 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 OR5AL2P-201ENST00000532185 920 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AL359212.1-201ENST00000556608 614 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AC174048.1-201ENST00000603389 144 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AL022154.1-201ENST00000604698 785 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 MIR92B-201ENST00000607575 96 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 AC104073.3-201ENST00000610942 955 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 DUSP12P1-201ENST00000612874 516 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 MIR6075-201ENST00000620782 95 ntBASIC3.98□□□□□ -1.77
CCDC136Q96JN2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms