Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AP002360.4-201ENST00000606980 481 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC092954.2-201ENST00000609103 430 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC009570.1-201ENST00000609599 745 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL589994.2-201ENST00000621124 579 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MIR4275-201ENST00000636486 87 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC027514.1-201ENST00000588561 1603 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 ZNF826P-207ENST00000622273 1910 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 CUL1P1-201ENST00000509510 2425 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.1-201ENST00000352915 104 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNY1P12-201ENST00000364251 105 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.367-201ENST00000365544 101 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.372-201ENST00000365599 102 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.409-201ENST00000383990 98 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU6-74P-201ENST00000384235 107 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU6-517P-201ENST00000384362 110 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 MIR558-201ENST00000384920 94 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 CALM2P3-201ENST00000400429 449 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AL451054.2-201ENST00000420896 202 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AL139413.1-201ENST00000421309 217 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AL353193.1-201ENST00000421444 268 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC063976.3-201ENST00000426849 329 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RPL7L1P10-201ENST00000427790 463 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC073464.1-201ENST00000429823 534 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 ARF4P2-201ENST00000430209 526 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 GPR143P-201ENST00000434155 205 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 MTND1P34-201ENST00000438556 671 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC093392.2-201ENST00000450682 337 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC108938.1-201ENST00000451204 136 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 MTND2P24-201ENST00000453434 806 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC007182.2-201ENST00000489251 402 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 HMGB1P29-201ENST00000505659 499 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU2-10P-201ENST00000516375 211 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU6-506P-201ENST00000516553 94 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 RNU6-1092P-201ENST00000516955 87 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AP006587.4-201ENST00000526053 529 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC124947.2-202ENST00000552735 133 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC010653.1-201ENST00000571108 881 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 NRBF2P5-201ENST00000603087 788 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC024153.1-201ENST00000603103 365 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC013553.2-201ENST00000604244 589 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC007684.1-201ENST00000609671 477 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC068831.7-201ENST00000616954 363 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC002076.2-201ENST00000617362 122 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC068792.1-201ENST00000621354 417 ntBASIC2.29□□□□□ -2.04
LINC01006Q8NI28 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01006Q8NI28 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNU1-75P-201ENST00000347264 129 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNU6-641P-201ENST00000384006 107 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNU6-1103P-201ENST00000384150 107 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AL139397.2-201ENST00000404529 772 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNU2-9P-201ENST00000410194 145 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNA5SP274-201ENST00000410484 108 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNA5SP31-201ENST00000411144 127 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 UBE2V1P10-201ENST00000414685 269 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 MTATP6P16-201ENST00000434543 526 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC002486.1-201ENST00000435098 391 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNA5SP310-201ENST00000459084 116 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AL049830.2-201ENST00000480072 201 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC010486.1-201ENST00000511793 424 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 RNU6-410P-201ENST00000517006 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms