Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND2P32-201ENST00000521584 1038 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 MTATP6P15-201ENST00000527233 835 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 AC009127.3-201ENST00000570531 403 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 RPS15AP11-201ENST00000594193 385 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 AP000403.1-201ENST00000603349 851 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 AC105148.1-201ENST00000604961 409 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 AC135507.1-201ENST00000607214 561 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 ELF2P3-201ENST00000445099 1506 ntBASIC2.26□□□□□ -2.05
NUDCD3Q8IVD9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 UBE2L2-201ENST00000254302 429 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 SNORA80A-201ENST00000363922 136 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-512P-201ENST00000364438 103 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-1200P-201ENST00000384162 107 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 NDUFS5P1-201ENST00000405668 289 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 RNU2-68P-201ENST00000410878 191 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 WARS2P1-201ENST00000429678 537 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 GPM6BP2-201ENST00000432046 144 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 GPM6BP1-201ENST00000446387 144 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 RPL23AP41-201ENST00000484754 458 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 MIR4319-201ENST00000577285 85 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 MIR4307-201ENST00000582802 84 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC021755.4-201ENST00000616620 456 ntBASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.25□□□□□ -2.05
NUDCD3Q8IVD9 AC010889.1-201ENST00000566193 2666 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 SNORD113-6-201ENST00000363345 75 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-1284P-201ENST00000363701 100 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 RPL36AP53-201ENST00000432891 316 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 TIMM9P1-201ENST00000436122 256 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC098831.1-201ENST00000440661 216 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 PGBD4P3-201ENST00000440731 581 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 FABP5P15-201ENST00000453566 214 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC108059.3-201ENST00000456388 214 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 RNA5SP356-201ENST00000515972 94 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 SNORA31.3-201ENST00000516029 96 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AL356432.3-201ENST00000568952 465 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AL354943.1-201ENST00000572103 781 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC007621.1-201ENST00000604544 437 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC027449.1-201ENST00000608890 407 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AL391813.2-201ENST00000609113 322 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 TUSC7.1-201ENST00000610969 165 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC005332.10-201ENST00000612725 619 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AP002782.1-201ENST00000623107 614 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC079416.3-201ENST00000624479 549 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 ZNF658B-202ENST00000615961 3375 ntBASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NUDCD3Q8IVD9 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms