Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RNA5SP97-201ENST00000365006 84 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 MIR134-201ENST00000385258 73 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RPL21P90-201ENST00000415692 466 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RPLP0P7-201ENST00000416050 667 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RPL17P36-201ENST00000420302 549 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC007919.1-201ENST00000429380 217 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AL445584.1-201ENST00000431451 330 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 GPM6BP2-201ENST00000432046 144 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 HMGB3P11-201ENST00000440127 604 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 GPM6BP1-201ENST00000446387 144 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC079140.5-201ENST00000507882 310 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 SNORA14.1-201ENST00000516113 141 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RNA5SP290-201ENST00000517133 127 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 GLYCAM1-201ENST00000546596 285 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 TRAV28-201ENST00000557548 323 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC090877.1-201ENST00000561418 344 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 MIR548AC-201ENST00000585049 88 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC012119.1-201ENST00000603184 222 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC103710.3-201ENST00000608157 948 ntBASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KHDC1Q4VXA5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC007785.2-201ENST00000598627 1916 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC007685.1-201ENST00000329806 452 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 Y_RNA.184-201ENST00000363884 108 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 U8.11-201ENST00000384699 133 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 U8.12-201ENST00000384701 133 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MIR493-201ENST00000385254 89 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 RPS4XP7-201ENST00000406274 780 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC073063.1-201ENST00000434352 607 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 U8.18-201ENST00000459285 133 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MTCO1P29-201ENST00000496868 288 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 Y_RNA.675-201ENST00000516389 149 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 CYCSP27-201ENST00000527643 293 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AP000889.2-201ENST00000532684 490 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 CYCSP30-201ENST00000546447 172 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MIR4795-201ENST00000584182 89 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MIR3942-201ENST00000585264 109 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AC006130.2-201ENST00000586202 326 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 AL020997.2-201ENST00000602607 184 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 ATP1B3P1-201ENST00000605365 821 ntBASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KHDC1Q4VXA5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
KHDC1Q4VXA5 AL672296.1-201ENST00000427780 2158 ntBASIC3.78□□□□□ -1.81
KHDC1Q4VXA5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 RNU1-64P-201ENST00000365443 163 ntBASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 Y_RNA.480-201ENST00000384364 102 ntBASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 Y_RNA.535-201ENST00000384612 99 ntBASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 MIR578-201ENST00000384828 96 ntBASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KHDC1Q4VXA5 AL445189.1-201ENST00000405722 338 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms