Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 MTCO1P39-201ENST00000426148 480 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.41□□□□□ -2.02
CKAP4Q07065 MTND4LP10-201ENST00000435146 291 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.41□□□□□ -2.02
CKAP4Q07065 MTND1P9-201ENST00000453775 944 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.41□□□□□ -2.02
CKAP4Q07065 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.41□□□□□ -2.02
CKAP4Q07065 AC109464.2-201ENST00000510242 943 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.41□□□□□ -2.02
CKAP4Q07065 RNU6-405P-201ENST00000516637 110 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 AP003122.4-201ENST00000530980 758 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.41□□□□□ -2.02
CKAP4Q07065 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKAP4Q07065 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKAP4Q07065 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 SEPT7P9-203ENST00000604116 343 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 NDUFA8P1-201ENST00000605525 367 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 Z99129.1-201ENST00000612510 255 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 AL590099.1-201ENST00000615276 138 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CKAP4Q07065 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
CKAP4Q07065 MTND4P1-201ENST00000457501 1466 ntBASIC2.4□□□□□ -2.02
CKAP4Q07065 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CKAP4Q07065 MIR518C-201ENST00000384822 101 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CKAP4Q07065 RNU2-47P-201ENST00000410649 186 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 RPS3AP3-201ENST00000411933 242 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
CKAP4Q07065 ARL5AP4-201ENST00000430731 512 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL049734.2-201ENST00000441066 616 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 MTND6P13-201ENST00000443510 523 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.4□□□□□ -2.03
CKAP4Q07065 MTCYBP1-201ENST00000454315 1119 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 snoU109.1-201ENST00000459339 135 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.4□□□□□ -2.03
CKAP4Q07065 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CKAP4Q07065 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.4□□□□□ -2.03
CKAP4Q07065 MTND2P33-201ENST00000506452 1031 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 RNU6-1095P-201ENST00000516148 108 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CKAP4Q07065 AP002453.2-201ENST00000533503 320 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.4□□□□□ -2.03
CKAP4Q07065 RPL21P5-201ENST00000554662 472 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC009163.5-201ENST00000575421 637 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL359999.1-201ENST00000604513 294 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC090578.1-201ENST00000604955 591 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC109347.2-201ENST00000610220 349 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL355472.4-201ENST00000610233 626 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC091304.9-201ENST00000612091 226 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC087241.4-201ENST00000612441 480 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL589743.7-201ENST00000612637 233 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AP001506.1-201ENST00000615444 211 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC009159.1-201ENST00000618386 642 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC079597.1-201ENST00000624306 508 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AL359740.1-201ENST00000624340 592 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CKAP4Q07065 MTND5P29-201ENST00000458676 1807 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 AC092125.1-201ENST00000562568 1995 ntBASIC2.4□□□□□ -2.03
CKAP4Q07065 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CKAP4Q07065 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CKAP4Q07065 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CKAP4Q07065 SET-203ENST00000372688 801 ntTSL 2 BASIC2.39□□□□□ -2.03
CKAP4Q07065 RNU2-66P-201ENST00000410650 161 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 RN7SKP140-201ENST00000411196 284 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC010975.2-201ENST00000427781 588 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 NDUFB4P6-201ENST00000436819 366 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 UBE2V1P13-201ENST00000436983 439 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC244505.5-201ENST00000443639 207 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 MTND1P27-201ENST00000451117 902 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC011825.1-201ENST00000484967 388 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC055855.1-201ENST00000489563 579 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 RNU6-720P-201ENST00000516363 108 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 RNU6-528P-201ENST00000516926 100 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC022880.1-201ENST00000534017 973 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 CR383656.7-201ENST00000548164 174 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 EIF1P4-201ENST00000572664 335 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 MTND1P15-201ENST00000579262 949 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC090616.3-201ENST00000582184 217 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 MIR3609-201ENST00000582661 80 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC080078.2-201ENST00000603766 501 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AC011451.2-201ENST00000604303 598 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms