Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAE1P78406 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAE1P78406 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RAE1P78406 SNORD113-7-201ENST00000363762 77 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RNU6-512P-201ENST00000364438 103 ntBASIC3.41□□□□□ -1.86
RAE1P78406 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RAE1P78406 RNA5SP129-201ENST00000410276 118 ntBASIC3.41□□□□□ -1.86
RAE1P78406 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RN7SKP263-201ENST00000411194 309 ntBASIC3.41□□□□□ -1.86
RAE1P78406 CRYBB2P1-203ENST00000415709 538 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RPLP0P7-201ENST00000416050 667 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.41□□□□□ -1.86
RAE1P78406 RPL7P2-201ENST00000427639 268 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 NDUFA5P4-201ENST00000436704 385 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 AC092001.1-201ENST00000453012 261 ntBASIC3.41□□□□□ -1.86
RAE1P78406 FABP5P15-201ENST00000453566 214 ntBASIC3.41□□□□□ -1.86
RAE1P78406 ANP32BP2-201ENST00000454525 545 ntBASIC3.41□□□□□ -1.86
RAE1P78406 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 RPL21P41-201ENST00000459863 264 ntBASIC3.41□□□□□ -1.86
RAE1P78406 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.41□□□□□ -1.86
RAE1P78406 RN7SL132P-201ENST00000478131 296 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RPS15AP34-201ENST00000487776 387 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 RNU6-864P-201ENST00000516256 108 ntBASIC3.41□□□□□ -1.86
RAE1P78406 Y_RNA.691-201ENST00000516611 103 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RNU6-143P-201ENST00000516942 93 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RNU6-1315P-201ENST00000517187 99 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RNA5SP291-201ENST00000517222 105 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RN7SKP289-201ENST00000517244 295 ntBASIC3.41□□□□□ -1.86
RAE1P78406 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RAE1P78406 AP000763.2-201ENST00000540641 163 ntBASIC3.41□□□□□ -1.86
RAE1P78406 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 AC011611.1-201ENST00000552179 197 ntBASIC3.41□□□□□ -1.86
RAE1P78406 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.41□□□□□ -1.86
RAE1P78406 MIR3941-201ENST00000582572 103 ntBASIC3.41□□□□□ -1.86
RAE1P78406 MIR4697-201ENST00000582977 78 ntBASIC3.41□□□□□ -1.86
RAE1P78406 MIR4719-201ENST00000585233 84 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.41□□□□□ -1.86
RAE1P78406 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.41□□□□□ -1.86
RAE1P78406 Z82243.1-201ENST00000609432 473 ntBASIC3.41□□□□□ -1.86
RAE1P78406 AC022140.2-201ENST00000623500 188 ntBASIC3.41□□□□□ -1.86
RAE1P78406 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.41□□□□□ -1.86
RAE1P78406 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
RAE1P78406 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RAE1P78406 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.41□□□□□ -1.86
RAE1P78406 RPS4XP5-202ENST00000449995 1334 ntBASIC3.41□□□□□ -1.86
RAE1P78406 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAE1P78406 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RAE1P78406 ZNF285B-201ENST00000561698 1767 ntBASIC3.4□□□□□ -1.86
RAE1P78406 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.4□□□□□ -1.86
RAE1P78406 RNU4-73P-201ENST00000363164 141 ntBASIC3.4□□□□□ -1.87
RAE1P78406 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RAE1P78406 DEFB109C-201ENST00000382575 264 ntBASIC3.4□□□□□ -1.87
RAE1P78406 DEFB109B-201ENST00000382656 264 ntBASIC3.4□□□□□ -1.87
RAE1P78406 Y_RNA.509-201ENST00000384506 99 ntBASIC3.4□□□□□ -1.87
RAE1P78406 MIR493-201ENST00000385254 89 ntBASIC3.4□□□□□ -1.87
RAE1P78406 MIR301A-201ENST00000385261 86 ntBASIC3.4□□□□□ -1.87
RAE1P78406 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAE1P78406 AL122016.1-201ENST00000403365 367 ntBASIC3.4□□□□□ -1.87
RAE1P78406 DBIP2-201ENST00000419076 262 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.4□□□□□ -1.87
RAE1P78406 HMGB3P11-201ENST00000440127 604 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
RAE1P78406 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.4□□□□□ -1.87
RAE1P78406 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.4□□□□□ -1.87
RAE1P78406 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.4□□□□□ -1.87
RAE1P78406 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.4□□□□□ -1.87
RAE1P78406 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAE1P78406 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.4□□□□□ -1.87
RAE1P78406 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 SNORA19.2-201ENST00000516013 114 ntBASIC3.4□□□□□ -1.87
RAE1P78406 SNORA70.18-201ENST00000516696 98 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AC090136.1-201ENST00000520009 240 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 AC026333.2-201ENST00000542164 106 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 TRAV28-201ENST00000557548 323 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.4□□□□□ -1.87
RAE1P78406 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAE1P78406 MIR548AC-201ENST00000585049 88 ntBASIC3.4□□□□□ -1.87
RAE1P78406 AC243960.4-201ENST00000600532 288 ntBASIC3.4□□□□□ -1.87
RAE1P78406 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
RAE1P78406 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.4□□□□□ -1.87
RAE1P78406 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
RAE1P78406 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.4□□□□□ -1.87
RAE1P78406 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
RAE1P78406 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 AC007785.2-201ENST00000598627 1916 ntBASIC3.39□□□□□ -1.87
RAE1P78406 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RAE1P78406 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
RAE1P78406 Y_RNA.184-201ENST00000363884 108 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RNU6-694P-201ENST00000364071 147 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RN7SKP227-201ENST00000364445 330 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms