Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL035666.1-201ENST00000446195 348 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AC103987.1-201ENST00000473394 348 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 MIR892C-201ENST00000516410 77 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 RNA5SP290-201ENST00000517133 127 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CLRN1P58418 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN1P58418 AC069240.1-201ENST00000548774 375 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.67□□□□□ -1.82
CLRN1P58418 AC011494.1-201ENST00000596454 237 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AC136443.5-201ENST00000603741 370 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AP000942.4-201ENST00000604811 241 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 MIR6798-201ENST00000612887 67 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AC011890.2-201ENST00000613393 294 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 RMST_4.1-201ENST00000616886 107 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 MIR3653-201ENST00000625572 110 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 MIR7641-1-201ENST00000627518 61 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 AL732372.2-225ENST00000642124 456 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.67□□□□□ -1.82
CLRN1P58418 AL133412.1-201ENST00000380194 2992 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN1P58418 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLRN1P58418 MTND4P1-201ENST00000457501 1466 ntBASIC3.67□□□□□ -1.82
CLRN1P58418 NOL8P1-201ENST00000508336 3529 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLRN1P58418 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLRN1P58418 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN1P58418 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN1P58418 RNA5SP502-201ENST00000362694 119 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 Y_RNA.148-201ENST00000363557 117 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 Y_RNA.151-201ENST00000363566 112 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 RHOT1P2-201ENST00000366423 333 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 Y_RNA.459-201ENST00000384251 102 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 RNU6-331P-201ENST00000384724 107 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN1P58418 AC108032.1-201ENST00000416706 207 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC113618.1-201ENST00000416747 285 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN1P58418 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC018865.2-201ENST00000423631 129 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 RPL18P10-201ENST00000425606 538 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC097713.2-201ENST00000430199 356 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PIGFP3-201ENST00000441918 722 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN1P58418 AC006011.1-201ENST00000442758 349 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 NOTCH2P1-201ENST00000443481 624 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 RNA5SP246-201ENST00000458909 119 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 KC877373.1-201ENST00000479066 408 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC105137.1-201ENST00000484355 562 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.66□□□□□ -1.82
CLRN1P58418 AC025554.1-201ENST00000505641 188 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PTP4A1P4-201ENST00000512479 322 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.66□□□□□ -1.82
CLRN1P58418 AC106900.2-201ENST00000604994 317 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 MIR6748-201ENST00000610433 71 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC004825.2-201ENST00000616634 455 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PLCE1P1-201ENST00000622094 305 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 AC112200.1-201ENST00000625015 234 ntBASIC3.66□□□□□ -1.82
CLRN1P58418 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN1P58418 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN1P58418 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.65□□□□□ -1.82
CLRN1P58418 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.65□□□□□ -1.82
CLRN1P58418 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CLRN1P58418 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN1P58418 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.65□□□□□ -1.82
CLRN1P58418 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.65□□□□□ -1.82
CLRN1P58418 AC116096.1-201ENST00000566804 2314 ntBASIC3.65□□□□□ -1.82
CLRN1P58418 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.82
CLRN1P58418 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
CLRN1P58418 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN1P58418 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.65□□□□□ -1.82
CLRN1P58418 Y_RNA.2-201ENST00000362330 96 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 SNORA60-201ENST00000362396 134 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 SNORD74.4-201ENST00000364129 80 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLRN1P58418 Y_RNA.463-201ENST00000384271 102 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AL445529.1-201ENST00000398713 389 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 RNU2-33P-201ENST00000410344 192 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 RNA5SP104-201ENST00000410989 118 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.65□□□□□ -1.83
CLRN1P58418 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.65□□□□□ -1.83
CLRN1P58418 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.65□□□□□ -1.83
CLRN1P58418 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.65□□□□□ -1.83
CLRN1P58418 CECR9-201ENST00000453421 199 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLRN1P58418 RN7SL481P-201ENST00000477764 299 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC011005.2-201ENST00000487324 359 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC091167.1-201ENST00000492017 396 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 RN7SL604P-201ENST00000492589 296 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC025445.1-201ENST00000502728 300 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.65□□□□□ -1.83
CLRN1P58418 SCARNA16.2-201ENST00000516520 172 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms