Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC103706.2-201ENST00000638080 240 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
CXCL12P48061 SDAD1P2-201ENST00000441308 2028 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.07□□□□□ -2.08
CXCL12P48061 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CXCL12P48061 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL12P48061 AC009902.3-201ENST00000606235 2172 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 SNORA67.1-201ENST00000364749 141 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 SNORA72.3-201ENST00000365074 132 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 RNU6-754P-201ENST00000391166 107 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AL590084.2-201ENST00000401481 382 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 RN7SKP266-201ENST00000410232 287 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 MTND1P21-201ENST00000412991 285 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL12P48061 UBE2FP1-201ENST00000416536 447 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 HMGB1P49-201ENST00000418882 569 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AL590383.1-201ENST00000428602 75 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 CR769767.1-201ENST00000436337 346 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL12P48061 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL12P48061 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL12P48061 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL12P48061 RNU6-420P-201ENST00000458780 107 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL12P48061 RPS15AP36-201ENST00000492022 382 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC104685.1-201ENST00000502445 371 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL12P48061 CDC42P4-201ENST00000510507 563 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 RNA5SP82-201ENST00000516707 92 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL12P48061 AP001372.4-201ENST00000524889 472 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AP002748.2-201ENST00000528671 348 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.06□□□□□ -2.08
CXCL12P48061 AK6P1-201ENST00000540219 478 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 GNAI2P1-201ENST00000541815 315 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AMZ2P1-203ENST00000565833 850 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL12P48061 AC136618.2-201ENST00000575091 400 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 MIR4781-201ENST00000585250 76 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AL031281.1-201ENST00000604049 488 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC072039.2-201ENST00000608883 439 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC011890.2-201ENST00000613393 294 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC079597.1-201ENST00000624306 508 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 PCMTD1P7-201ENST00000634506 357 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL12P48061 DDX10P1-201ENST00000448545 1933 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 ZNF271P-202ENST00000465539 1970 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 PABPC1P9-201ENST00000426076 1612 ntBASIC2.06□□□□□ -2.08
CXCL12P48061 AC007785.2-201ENST00000598627 1916 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
CXCL12P48061 RNU6-432P-201ENST00000384196 109 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 RNU6-198P-201ENST00000384258 104 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.05□□□□□ -2.08
CXCL12P48061 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 RPS20P20-201ENST00000460498 340 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC034222.1-201ENST00000494052 532 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL12P48061 NRON-201ENST00000517270 370 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.05□□□□□ -2.08
CXCL12P48061 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL12P48061 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL12P48061 AC110588.1-201ENST00000559699 137 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC068135.2-201ENST00000569293 1028 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 MIR544B-201ENST00000582372 78 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.05□□□□□ -2.08
CXCL12P48061 TPMTP1-201ENST00000592307 737 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC112204.3-201ENST00000623822 332 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AL160394.1-201ENST00000624765 724 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 MTND5P33-201ENST00000571250 1450 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL12P48061 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.05□□□□□ -2.08
CXCL12P48061 AL049641.1-201ENST00000441055 1948 ntBASIC2.05□□□□□ -2.08
CXCL12P48061 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL12P48061 SNORD113-6-201ENST00000363345 75 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC119751.3-201ENST00000399720 670 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 MIR1287-201ENST00000408492 90 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AL359704.1-201ENST00000411586 781 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 Z85995.1-201ENST00000415547 335 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 Z82209.1-201ENST00000422141 2135 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC007919.1-201ENST00000429380 217 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.04□□□□□ -2.08
CXCL12P48061 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL12P48061 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.04□□□□□ -2.08
CXCL12P48061 CBWD4P-201ENST00000445695 655 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 DDX3P2-201ENST00000446138 111 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 ANKRD26P4-201ENST00000455755 950 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 SNORD11.1-201ENST00000459482 85 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms