Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPL28P46779 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL28P46779 FABP5P15-201ENST00000453566 214 ntBASIC1.33□□□□□ -2.2
RPL28P46779 RPL23AP3-201ENST00000453844 468 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AC008481.1-201ENST00000463278 396 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL28P46779 MRPS17P9-201ENST00000511924 393 ntBASIC1.33□□□□□ -2.2
RPL28P46779 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.33□□□□□ -2.2
RPL28P46779 SCARNA16.3-201ENST00000516595 184 ntBASIC1.33□□□□□ -2.2
RPL28P46779 RNA5SP137-201ENST00000516833 135 ntBASIC1.33□□□□□ -2.2
RPL28P46779 RNU6-1028P-201ENST00000517164 93 ntBASIC1.33□□□□□ -2.2
RPL28P46779 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
RPL28P46779 DEFB131D-201ENST00000526803 184 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL28P46779 AL121821.2-201ENST00000556081 394 ntBASIC1.33□□□□□ -2.2
RPL28P46779 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL28P46779 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL28P46779 MIR3122-201ENST00000577243 73 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AF129408.1-201ENST00000608767 431 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.33□□□□□ -2.2
RPL28P46779 AC091932.3-201ENST00000624223 323 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AC010149.2-201ENST00000637608 315 ntBASIC1.33□□□□□ -2.2
RPL28P46779 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPL28P46779 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AC008555.8-201ENST00000623602 2168 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC104454.1-201ENST00000421341 1401 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNU4-82P-201ENST00000362443 140 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNU1-72P-201ENST00000362976 153 ntBASIC1.32□□□□□ -2.2
RPL28P46779 Y_RNA.500-201ENST00000384466 111 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNU6-748P-201ENST00000384648 107 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNU6-19P-201ENST00000384718 107 ntBASIC1.32□□□□□ -2.2
RPL28P46779 MIR147B-201ENST00000390185 80 ntBASIC1.32□□□□□ -2.2
RPL28P46779 HMGN2P39-201ENST00000398005 273 ntBASIC1.32□□□□□ -2.2
RPL28P46779 NDUFS5P1-201ENST00000405668 289 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNU2-63P-201ENST00000410792 194 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.32□□□□□ -2.2
RPL28P46779 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL28P46779 AC096920.1-201ENST00000423991 241 ntBASIC1.32□□□□□ -2.2
RPL28P46779 PTGES3P4-201ENST00000426243 356 ntBASIC1.32□□□□□ -2.2
RPL28P46779 ISCA1P1-201ENST00000426679 387 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC244035.1-201ENST00000430042 390 ntBASIC1.32□□□□□ -2.2
RPL28P46779 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL28P46779 USP9YP8-201ENST00000441913 500 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL28P46779 RPL7P36-201ENST00000444633 681 ntBASIC1.32□□□□□ -2.2
RPL28P46779 RNY4P37-201ENST00000516225 96 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.32□□□□□ -2.2
RPL28P46779 MIR3126-201ENST00000577443 74 ntBASIC1.32□□□□□ -2.2
RPL28P46779 MIR4287-201ENST00000579398 78 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC126365.2-201ENST00000580630 379 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC090897.2-201ENST00000581715 130 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL28P46779 AF131215.7-201ENST00000602443 707 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC021171.1-201ENST00000603137 706 ntBASIC1.32□□□□□ -2.2
RPL28P46779 AC098826.3-201ENST00000603823 466 ntBASIC1.32□□□□□ -2.2
RPL28P46779 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPL28P46779 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
RPL28P46779 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL28P46779 AP003485.1-201ENST00000625093 753 ntBASIC1.32□□□□□ -2.2
RPL28P46779 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPL28P46779 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
RPL28P46779 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL28P46779 RNA5SP289-201ENST00000362332 137 ntBASIC1.31□□□□□ -2.2
RPL28P46779 GSTA9P-201ENST00000406231 611 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL28P46779 AC009963.1-201ENST00000417265 157 ntBASIC1.31□□□□□ -2.2
RPL28P46779 TIMM9P2-201ENST00000419324 266 ntBASIC1.31□□□□□ -2.2
RPL28P46779 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL28P46779 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL28P46779 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AL353689.1-201ENST00000438895 199 ntBASIC1.31□□□□□ -2.2
RPL28P46779 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL28P46779 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL28P46779 AL136380.1-201ENST00000447970 162 ntBASIC1.31□□□□□ -2.2
RPL28P46779 TPT1P14-201ENST00000448018 505 ntBASIC1.31□□□□□ -2.2
RPL28P46779 PMCHL2-203ENST00000457791 237 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC117503.1-201ENST00000472241 394 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC010631.1-201ENST00000474150 156 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC018437.1-201ENST00000492214 406 ntBASIC1.31□□□□□ -2.2
RPL28P46779 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.31□□□□□ -2.2
RPL28P46779 RPL22P13-201ENST00000493291 347 ntBASIC1.31□□□□□ -2.2
RPL28P46779 SMURF2P1-201ENST00000514992 481 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL28P46779 FAM92A1P1-201ENST00000528023 890 ntBASIC1.31□□□□□ -2.2
RPL28P46779 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPL28P46779 AC005832.3-201ENST00000537929 631 ntBASIC1.31□□□□□ -2.2
RPL28P46779 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL28P46779 AC233702.2-202ENST00000562547 291 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL28P46779 AC090079.2-201ENST00000575289 768 ntBASIC1.31□□□□□ -2.2
RPL28P46779 MIR1273D-201ENST00000577266 86 ntBASIC1.31□□□□□ -2.2
RPL28P46779 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL28P46779 MIR4672-201ENST00000583126 81 ntBASIC1.31□□□□□ -2.2
RPL28P46779 UBE2L4-201ENST00000587688 464 ntBASIC1.31□□□□□ -2.2
RPL28P46779 BNIP3P23-201ENST00000599655 511 ntBASIC1.31□□□□□ -2.2
RPL28P46779 MTCYBP22-201ENST00000603788 447 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AP002802.2-201ENST00000605877 235 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL28P46779 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL28P46779 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms