Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MTND1P21-201ENST00000412991 285 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AL353706.1-201ENST00000436728 494 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 RPL7P18-201ENST00000478965 734 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AC140059.1-201ENST00000489238 361 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 RNU6-970P-201ENST00000516312 107 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
CASQ1P31415 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.93□□□□□ -2.1
CASQ1P31415 AC007375.1-201ENST00000554513 578 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.93□□□□□ -2.1
CASQ1P31415 AF038458.1-201ENST00000588406 262 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.93□□□□□ -2.1
CASQ1P31415 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.93□□□□□ -2.1
CASQ1P31415 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.93□□□□□ -2.1
CASQ1P31415 AC008121.3-201ENST00000618726 433 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AC012150.2-201ENST00000621300 544 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 AP001002.2-201ENST00000625137 386 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
CASQ1P31415 OR5T3-201ENST00000303059 1023 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 MIR126-201ENST00000362291 85 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 USP9YP6-201ENST00000413550 854 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 BX664727.1-201ENST00000416024 466 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AL353621.1-201ENST00000418219 243 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.92□□□□□ -2.1
CASQ1P31415 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 AC008379.1-201ENST00000463655 464 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 RPL30P9-201ENST00000465586 330 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AC110760.3-202ENST00000515177 371 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CASQ1P31415 AC022880.1-201ENST00000534017 973 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 AC012213.3-201ENST00000577199 777 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
CASQ1P31415 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.92□□□□□ -2.1
CASQ1P31415 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
CASQ1P31415 RNU5E-1-201ENST00000362477 120 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 RNU6-997P-201ENST00000384725 107 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 MIR23B-201ENST00000384832 97 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC078974.1-201ENST00000411597 223 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 TPMTP2-201ENST00000414372 726 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AL357078.2-201ENST00000416486 427 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 BX119904.4-201ENST00000424402 301 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.91□□□□□ -2.1
CASQ1P31415 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.91□□□□□ -2.1
CASQ1P31415 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 KATNBL1P6-201ENST00000453433 915 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.91□□□□□ -2.1
CASQ1P31415 AC007182.2-201ENST00000489251 402 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC114781.4-201ENST00000513707 639 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.91□□□□□ -2.1
CASQ1P31415 NDUFA5P6-201ENST00000542110 379 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 CYB5AP5-201ENST00000549779 389 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.91□□□□□ -2.1
CASQ1P31415 SNRPGP17-201ENST00000603780 214 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CASQ1P31415 MTCO1P4-201ENST00000520516 1409 ntBASIC1.91□□□□□ -2.1
CASQ1P31415 RNU6-1167P-201ENST00000363227 94 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CASQ1P31415 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.9□□□□□ -2.11
CASQ1P31415 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.9□□□□□ -2.11
CASQ1P31415 MTND4P6-201ENST00000438297 472 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 ARPC3P5-201ENST00000448802 534 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.9□□□□□ -2.11
CASQ1P31415 MTND2P30-201ENST00000456663 382 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC093281.2-201ENST00000510153 597 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.9□□□□□ -2.11
CASQ1P31415 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CASQ1P31415 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.9□□□□□ -2.11
CASQ1P31415 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.9□□□□□ -2.11
CASQ1P31415 LINC00557-201ENST00000563184 1279 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC009063.1-201ENST00000563342 702 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC009097.3-201ENST00000563557 1018 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC068790.3-201ENST00000602988 553 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC239803.2-201ENST00000610161 430 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 MIR8084-201ENST00000614105 89 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AC017037.3-201ENST00000625016 472 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
CASQ1P31415 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.9□□□□□ -2.11
CASQ1P31415 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CASQ1P31415 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CASQ1P31415 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CASQ1P31415 EIF4EP2-201ENST00000422816 654 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms