Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 RNU6-914P-201ENST00000516749 109 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.18□□□□□ -1.9
BDNFP23560 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 MIR1273C-201ENST00000578669 77 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.18□□□□□ -1.9
BDNFP23560 MIR4760-201ENST00000585040 80 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
BDNFP23560 AC105129.3-201ENST00000605455 485 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 AC138749.5-201ENST00000611461 208 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC116165.2-201ENST00000616705 206 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
BDNFP23560 CDC27P3-201ENST00000635418 1910 ntBASIC3.18□□□□□ -1.9
BDNFP23560 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
BDNFP23560 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.17□□□□□ -1.9
BDNFP23560 MAPK10-266ENST00000641066 6555 ntBASIC3.17□□□□□ -1.9
BDNFP23560 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BDNFP23560 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
BDNFP23560 AL109809.4-201ENST00000603520 2185 ntBASIC3.17□□□□□ -1.9
BDNFP23560 Y_RNA.33-201ENST00000362591 102 ntBASIC3.17□□□□□ -1.9
BDNFP23560 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
BDNFP23560 SNORD56.2-201ENST00000363242 71 ntBASIC3.17□□□□□ -1.9
BDNFP23560 RNY1P12-201ENST00000364251 105 ntBASIC3.17□□□□□ -1.9
BDNFP23560 RNU5E-5P-201ENST00000365379 116 ntBASIC3.17□□□□□ -1.9
BDNFP23560 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.17□□□□□ -1.9
BDNFP23560 U6atac.2-201ENST00000408644 118 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
BDNFP23560 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.17□□□□□ -1.9
BDNFP23560 AC007560.1-201ENST00000426912 237 ntBASIC3.17□□□□□ -1.9
BDNFP23560 MTND1P30-201ENST00000441241 901 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.17□□□□□ -1.9
BDNFP23560 RPS3AP14-201ENST00000483907 780 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC007182.2-201ENST00000489251 402 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC005178.1-201ENST00000508392 440 ntBASIC3.17□□□□□ -1.9
BDNFP23560 SNORA31.6-201ENST00000516241 130 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.17□□□□□ -1.9
BDNFP23560 AC022878.1-201ENST00000530684 149 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC010186.2-204ENST00000537668 439 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.17□□□□□ -1.9
BDNFP23560 EIF4BP1-201ENST00000554881 351 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AL157871.3-201ENST00000557231 293 ntBASIC3.17□□□□□ -1.9
BDNFP23560 MIR5697-201ENST00000578045 78 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.17□□□□□ -1.9
BDNFP23560 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.17□□□□□ -1.9
BDNFP23560 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC012360.2-201ENST00000609349 391 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC006386.2-201ENST00000624491 75 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC012005.1-201ENST00000624575 75 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
BDNFP23560 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
BDNFP23560 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BDNFP23560 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
BDNFP23560 AC092447.7-201ENST00000422212 1621 ntBASIC3.16□□□□□ -1.9
BDNFP23560 Y_RNA.534-201ENST00000384599 112 ntBASIC3.16□□□□□ -1.9
BDNFP23560 MTCYBP36-201ENST00000404146 440 ntBASIC3.16□□□□□ -1.9
BDNFP23560 EEF1A1P41-201ENST00000414667 207 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AL109913.1-201ENST00000421173 514 ntBASIC3.16□□□□□ -1.9
BDNFP23560 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.16□□□□□ -1.9
BDNFP23560 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.16□□□□□ -1.9
BDNFP23560 AC092001.1-201ENST00000453012 261 ntBASIC3.16□□□□□ -1.9
BDNFP23560 ZNF114P1-201ENST00000453500 292 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
BDNFP23560 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC023194.1-201ENST00000493084 308 ntBASIC3.16□□□□□ -1.9
BDNFP23560 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC109927.2-201ENST00000506416 303 ntBASIC3.16□□□□□ -1.9
BDNFP23560 RNA5SP337-201ENST00000517007 109 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.16□□□□□ -1.9
BDNFP23560 AC025755.1-201ENST00000521306 278 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.16□□□□□ -1.9
BDNFP23560 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BDNFP23560 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.16□□□□□ -1.9
BDNFP23560 MIR5571-201ENST00000577998 113 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AP002360.4-201ENST00000606980 481 ntBASIC3.16□□□□□ -1.9
BDNFP23560 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.16□□□□□ -1.9
BDNFP23560 AC027807.2-201ENST00000616099 408 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AC092140.2-201ENST00000618027 521 ntBASIC3.16□□□□□ -1.9
BDNFP23560 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
BDNFP23560 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
BDNFP23560 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BDNFP23560 AC008264.2-201ENST00000610193 3731 ntBASIC3.16□□□□□ -1.9
BDNFP23560 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.9
BDNFP23560 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
BDNFP23560 AC138393.1-203ENST00000327086 343 ntBASIC3.15□□□□□ -1.91
BDNFP23560 RNU6-220P-201ENST00000390919 107 ntBASIC3.15□□□□□ -1.91
BDNFP23560 RNU6-1025P-201ENST00000410629 104 ntBASIC3.15□□□□□ -1.91
BDNFP23560 RNU6-920P-201ENST00000410926 92 ntBASIC3.15□□□□□ -1.91
BDNFP23560 RNU6-1328P-201ENST00000410938 106 ntBASIC3.15□□□□□ -1.91
BDNFP23560 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.15□□□□□ -1.91
BDNFP23560 AC009518.2-201ENST00000418056 731 ntBASIC3.15□□□□□ -1.91
BDNFP23560 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
BDNFP23560 AC011233.1-201ENST00000422812 283 ntBASIC3.15□□□□□ -1.91
BDNFP23560 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
BDNFP23560 RPL23AP30-201ENST00000432419 501 ntBASIC3.15□□□□□ -1.91
BDNFP23560 FABP5P13-201ENST00000452144 328 ntBASIC3.15□□□□□ -1.91
BDNFP23560 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.15□□□□□ -1.91
BDNFP23560 AP001486.1-201ENST00000463339 476 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms