Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.45□□□□□ -2.18
CFTRP13569 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.45□□□□□ -2.18
CFTRP13569 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CFTRP13569 HAUS6P2-201ENST00000433254 2404 ntBASIC1.45□□□□□ -2.18
CFTRP13569 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CFTRP13569 RNU6-1197P-201ENST00000391183 107 ntBASIC1.44□□□□□ -2.18
CFTRP13569 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.44□□□□□ -2.18
CFTRP13569 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.44□□□□□ -2.18
CFTRP13569 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.44□□□□□ -2.18
CFTRP13569 Y_RNA.681-201ENST00000516445 113 ntBASIC1.44□□□□□ -2.18
CFTRP13569 HMGB1P14-201ENST00000557424 591 ntBASIC1.44□□□□□ -2.18
CFTRP13569 AL590095.2-201ENST00000604136 117 ntBASIC1.44□□□□□ -2.18
CFTRP13569 AC103810.9-201ENST00000606688 112 ntBASIC1.44□□□□□ -2.18
CFTRP13569 AP002826.1-201ENST00000608835 315 ntBASIC1.44□□□□□ -2.18
CFTRP13569 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.44□□□□□ -2.18
CFTRP13569 CCT4P2-201ENST00000233836 1548 ntBASIC1.44□□□□□ -2.18
CFTRP13569 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CFTRP13569 RNU6-17P-201ENST00000384245 107 ntBASIC1.43□□□□□ -2.18
CFTRP13569 RNU6-18P-201ENST00000384527 107 ntBASIC1.43□□□□□ -2.18
CFTRP13569 RNU6-821P-201ENST00000390995 107 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AL136372.1-201ENST00000403060 228 ntBASIC1.43□□□□□ -2.18
CFTRP13569 RNA5SP193-201ENST00000410353 107 ntBASIC1.43□□□□□ -2.18
CFTRP13569 FCF1P2-201ENST00000415284 583 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC092648.1-201ENST00000425870 423 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AL392003.1-201ENST00000434394 243 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC004383.1-201ENST00000438135 289 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 AC055731.1-201ENST00000474387 401 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 AC022880.1-201ENST00000534017 973 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 MIR4287-201ENST00000579398 78 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AL355877.2-201ENST00000603670 358 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC021749.1-201ENST00000604322 607 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AC109809.1-201ENST00000619665 545 ntBASIC1.43□□□□□ -2.18
CFTRP13569 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CFTRP13569 RNU4-42P-201ENST00000364738 142 ntBASIC1.43□□□□□ -2.18
CFTRP13569 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 C1DP3-201ENST00000455013 423 ntBASIC1.43□□□□□ -2.18
CFTRP13569 RNA5SP330-201ENST00000517096 96 ntBASIC1.43□□□□□ -2.18
CFTRP13569 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.43□□□□□ -2.18
CFTRP13569 AC025165.5-201ENST00000602802 578 ntBASIC1.43□□□□□ -2.18
CFTRP13569 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.43□□□□□ -2.18
CFTRP13569 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CFTRP13569 Y_RNA.115-201ENST00000363272 98 ntBASIC1.42□□□□□ -2.18
CFTRP13569 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CFTRP13569 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.42□□□□□ -2.18
CFTRP13569 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.42□□□□□ -2.18
CFTRP13569 AC234064.1-201ENST00000436312 247 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AC097499.1-201ENST00000444277 208 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AC018437.1-201ENST00000492214 406 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.42□□□□□ -2.18
CFTRP13569 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
CFTRP13569 MIR5571-201ENST00000577998 113 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AC025588.3-201ENST00000604182 274 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AC135507.1-201ENST00000607214 561 ntBASIC1.42□□□□□ -2.18
CFTRP13569 AC004908.2-201ENST00000609090 574 ntBASIC1.42□□□□□ -2.18
CFTRP13569 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CFTRP13569 XKRYP1-201ENST00000423438 492 ntBASIC1.41□□□□□ -2.18
CFTRP13569 RPL27AP8-201ENST00000424277 446 ntBASIC1.41□□□□□ -2.18
CFTRP13569 XKRYP2-201ENST00000432915 492 ntBASIC1.41□□□□□ -2.18
CFTRP13569 RPL7P29-201ENST00000437151 728 ntBASIC1.41□□□□□ -2.18
CFTRP13569 AC004865.1-201ENST00000442276 1003 ntBASIC1.41□□□□□ -2.18
CFTRP13569 HMGN2P10-201ENST00000448085 265 ntBASIC1.41□□□□□ -2.18
CFTRP13569 RNU7-23P-201ENST00000459465 62 ntBASIC1.41□□□□□ -2.18
CFTRP13569 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.41□□□□□ -2.18
CFTRP13569 KATNBL1P4-201ENST00000503545 918 ntBASIC1.41□□□□□ -2.18
CFTRP13569 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.41□□□□□ -2.18
CFTRP13569 AC105313.1-201ENST00000509121 353 ntBASIC1.41□□□□□ -2.18
CFTRP13569 RNA5SP476-201ENST00000516613 103 ntBASIC1.41□□□□□ -2.18
CFTRP13569 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.41□□□□□ -2.18
CFTRP13569 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.41□□□□□ -2.18
CFTRP13569 AC090116.1-201ENST00000615679 446 ntBASIC1.41□□□□□ -2.18
CFTRP13569 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CFTRP13569 RPL7P34-201ENST00000433316 712 ntBASIC1.4□□□□□ -2.19
CFTRP13569 FGF7P5-201ENST00000441829 291 ntBASIC1.4□□□□□ -2.19
CFTRP13569 AL022238.1-201ENST00000442557 355 ntBASIC1.4□□□□□ -2.19
CFTRP13569 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.4□□□□□ -2.19
CFTRP13569 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.4□□□□□ -2.19
CFTRP13569 RNU2-19P-201ENST00000517288 84 ntBASIC1.4□□□□□ -2.19
CFTRP13569 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.4□□□□□ -2.19
CFTRP13569 MIR4711-201ENST00000578274 70 ntBASIC1.4□□□□□ -2.19
CFTRP13569 AP003399.1-201ENST00000637534 361 ntBASIC1.4□□□□□ -2.19
CFTRP13569 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CFTRP13569 RNU6-220P-201ENST00000390919 107 ntBASIC1.39□□□□□ -2.19
CFTRP13569 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.39□□□□□ -2.19
CFTRP13569 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.39□□□□□ -2.19
CFTRP13569 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.39□□□□□ -2.19
CFTRP13569 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.39□□□□□ -2.19
CFTRP13569 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.39□□□□□ -2.19
CFTRP13569 AL589880.1-201ENST00000448271 287 ntBASIC1.39□□□□□ -2.19
CFTRP13569 MTND2P19-201ENST00000449129 1012 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.39□□□□□ -2.19
CFTRP13569 KLF3P2-201ENST00000465138 268 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AC107626.1-201ENST00000471084 183 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms