Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC025754.2-201ENST00000606491 432 ntBASIC1.76□□□□□ -2.13
APOEP02649 AP002791.1-201ENST00000623291 381 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.76□□□□□ -2.13
APOEP02649 MIR1322-201ENST00000638013 71 ntBASIC1.76□□□□□ -2.13
APOEP02649 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
APOEP02649 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
APOEP02649 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
APOEP02649 SNORA23-201ENST00000365128 182 ntBASIC1.75□□□□□ -2.13
APOEP02649 USP9YP19-201ENST00000412165 485 ntBASIC1.75□□□□□ -2.13
APOEP02649 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
APOEP02649 USP9YP13-201ENST00000417797 480 ntBASIC1.75□□□□□ -2.13
APOEP02649 GTF2IP7-202ENST00000436677 309 ntBASIC1.75□□□□□ -2.13
APOEP02649 FABP5P14-201ENST00000437273 393 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC098831.1-201ENST00000440661 216 ntBASIC1.75□□□□□ -2.13
APOEP02649 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
APOEP02649 BZW1P2-201ENST00000473537 826 ntBASIC1.75□□□□□ -2.13
APOEP02649 RPL7P18-201ENST00000478965 734 ntBASIC1.75□□□□□ -2.13
APOEP02649 HSBP1P1-201ENST00000555205 166 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC090615.1-201ENST00000577519 154 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.75□□□□□ -2.13
APOEP02649 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC100814.1-201ENST00000606963 623 ntBASIC1.75□□□□□ -2.13
APOEP02649 AL138478.1-201ENST00000612252 832 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC024257.5-201ENST00000612739 531 ntBASIC1.75□□□□□ -2.13
APOEP02649 AC022202.1-201ENST00000613515 211 ntBASIC1.75□□□□□ -2.13
APOEP02649 HPVC1-201ENST00000629899 1198 ntBASIC1.75□□□□□ -2.13
APOEP02649 ZNF702P-202ENST00000434269 1966 ntBASIC1.75□□□□□ -2.13
APOEP02649 RNU6-28P-201ENST00000362378 107 ntBASIC1.74□□□□□ -2.13
APOEP02649 Y_RNA.25-201ENST00000362528 102 ntBASIC1.74□□□□□ -2.13
APOEP02649 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
APOEP02649 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
APOEP02649 MIR147B-201ENST00000390185 80 ntBASIC1.74□□□□□ -2.13
APOEP02649 MCTS2P-201ENST00000394552 546 ntBASIC1.74□□□□□ -2.13
APOEP02649 U6atac.2-201ENST00000408644 118 ntBASIC1.74□□□□□ -2.13
APOEP02649 EDDM3CP-201ENST00000415977 425 ntBASIC1.74□□□□□ -2.13
APOEP02649 BX664727.1-201ENST00000416024 466 ntBASIC1.74□□□□□ -2.13
APOEP02649 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.74□□□□□ -2.13
APOEP02649 AIMP1P2-201ENST00000425294 312 ntBASIC1.74□□□□□ -2.13
APOEP02649 MTCYBP15-201ENST00000433123 1127 ntBASIC1.74□□□□□ -2.13
APOEP02649 MTCO3P43-201ENST00000440974 771 ntBASIC1.74□□□□□ -2.13
APOEP02649 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.74□□□□□ -2.13
APOEP02649 RPL7P12-201ENST00000446719 750 ntBASIC1.74□□□□□ -2.13
APOEP02649 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.74□□□□□ -2.13
APOEP02649 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.74□□□□□ -2.13
APOEP02649 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.74□□□□□ -2.13
APOEP02649 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.74□□□□□ -2.13
APOEP02649 AC034222.1-201ENST00000494052 532 ntBASIC1.74□□□□□ -2.13
APOEP02649 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.74□□□□□ -2.13
APOEP02649 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.74□□□□□ -2.13
APOEP02649 AP001189.2-201ENST00000527320 189 ntBASIC1.74□□□□□ -2.13
APOEP02649 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
APOEP02649 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
APOEP02649 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.74□□□□□ -2.13
APOEP02649 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.74□□□□□ -2.13
APOEP02649 AC122134.1-202ENST00000569111 1201 ntBASIC1.74□□□□□ -2.13
APOEP02649 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
APOEP02649 AC009977.1-201ENST00000586015 570 ntBASIC1.74□□□□□ -2.13
APOEP02649 AC108479.2-201ENST00000617314 601 ntBASIC1.74□□□□□ -2.13
APOEP02649 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.74□□□□□ -2.13
APOEP02649 AC116618.1-201ENST00000634617 774 ntBASIC1.74□□□□□ -2.13
APOEP02649 MIR3199-2-201ENST00000636243 86 ntBASIC1.74□□□□□ -2.13
APOEP02649 AC005539.1-201ENST00000443768 1479 ntBASIC1.74□□□□□ -2.13
APOEP02649 MTND4P21-201ENST00000453886 1357 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL451054.2-201ENST00000420896 202 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.73□□□□□ -2.13
APOEP02649 AL353689.1-201ENST00000438895 199 ntBASIC1.73□□□□□ -2.13
APOEP02649 USP9YP22-201ENST00000438971 294 ntBASIC1.73□□□□□ -2.13
APOEP02649 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
APOEP02649 MTND2P3-201ENST00000452458 470 ntBASIC1.73□□□□□ -2.13
APOEP02649 TPRKBP1-201ENST00000456243 481 ntBASIC1.73□□□□□ -2.13
APOEP02649 MTND2P30-201ENST00000456663 382 ntBASIC1.73□□□□□ -2.13
APOEP02649 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.73□□□□□ -2.13
APOEP02649 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.73□□□□□ -2.13
APOEP02649 AC008526.1-201ENST00000509149 338 ntBASIC1.73□□□□□ -2.13
APOEP02649 AC093281.2-201ENST00000510153 597 ntBASIC1.73□□□□□ -2.13
APOEP02649 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.73□□□□□ -2.13
APOEP02649 MIR4529-201ENST00000578110 78 ntBASIC1.73□□□□□ -2.13
APOEP02649 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.73□□□□□ -2.13
APOEP02649 AP001542.1-201ENST00000591314 200 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL138963.2-201ENST00000605137 226 ntBASIC1.73□□□□□ -2.13
APOEP02649 AC004805.2-201ENST00000605382 482 ntBASIC1.73□□□□□ -2.13
APOEP02649 AC106052.1-201ENST00000608029 497 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL121652.1-201ENST00000608851 448 ntBASIC1.73□□□□□ -2.13
APOEP02649 AC107075.1-201ENST00000613695 314 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL359757.2-201ENST00000624309 274 ntBASIC1.73□□□□□ -2.13
APOEP02649 MIR4275-201ENST00000636486 87 ntBASIC1.73□□□□□ -2.13
APOEP02649 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
APOEP02649 MTND5P30-201ENST00000452896 1731 ntBASIC1.73□□□□□ -2.13
APOEP02649 AL138713.1-201ENST00000624026 2130 ntBASIC1.73□□□□□ -2.13
APOEP02649 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
APOEP02649 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOEP02649 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOEP02649 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOEP02649 RNU6-1159P-201ENST00000362933 107 ntBASIC1.72□□□□□ -2.13
APOEP02649 RNU6-778P-201ENST00000363269 103 ntBASIC1.72□□□□□ -2.13
APOEP02649 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOEP02649 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
APOEP02649 NDUFS5P4-201ENST00000412983 318 ntBASIC1.72□□□□□ -2.13
APOEP02649 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.72□□□□□ -2.13
APOEP02649 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms