Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 HMGN1P30-201ENST00000589286 268 ntBASIC2.86□□□□□ -1.95
SIX3O95343 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.86□□□□□ -1.95
SIX3O95343 AC012119.1-201ENST00000603184 222 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AL033523.1-201ENST00000605153 153 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AL158032.1-201ENST00000605401 106 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.86□□□□□ -1.95
SIX3O95343 AC103710.2-201ENST00000609912 942 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AC087241.4-201ENST00000612441 480 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AC025594.3-201ENST00000613068 790 ntBASIC2.86□□□□□ -1.95
SIX3O95343 AL133173.2-201ENST00000614270 90 ntBASIC2.86□□□□□ -1.95
SIX3O95343 Z99571.1-201ENST00000636677 394 ntBASIC2.86□□□□□ -1.95
SIX3O95343 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.86□□□□□ -1.95
SIX3O95343 AC108206.1-201ENST00000570186 4159 ntBASIC2.86□□□□□ -1.95
SIX3O95343 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SIX3O95343 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SIX3O95343 GABRG2-229ENST00000641017 3628 ntBASIC2.86□□□□□ -1.95
SIX3O95343 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SIX3O95343 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SIX3O95343 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.85□□□□□ -1.95
SIX3O95343 CR848007.1-201ENST00000442354 1699 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AL137003.2-201ENST00000606924 2538 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SIX3O95343 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIX3O95343 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SIX3O95343 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
SIX3O95343 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIX3O95343 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIX3O95343 HSPE1P11-201ENST00000339579 310 ntBASIC2.85□□□□□ -1.95
SIX3O95343 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
SIX3O95343 SMIM11P1-201ENST00000369586 178 ntBASIC2.85□□□□□ -1.95
SIX3O95343 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.85□□□□□ -1.95
SIX3O95343 RNU6-946P-201ENST00000383878 107 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MIR301A-201ENST00000385261 86 ntBASIC2.85□□□□□ -1.95
SIX3O95343 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.85□□□□□ -1.95
SIX3O95343 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.85□□□□□ -1.95
SIX3O95343 AL079342.1-201ENST00000401460 267 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AL139397.2-201ENST00000404529 772 ntBASIC2.85□□□□□ -1.95
SIX3O95343 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC107081.1-201ENST00000414975 361 ntBASIC2.85□□□□□ -1.95
SIX3O95343 ISCA1P1-201ENST00000426679 387 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 AC098826.2-201ENST00000452011 651 ntBASIC2.85□□□□□ -1.95
SIX3O95343 FABP5P15-201ENST00000453566 214 ntBASIC2.85□□□□□ -1.95
SIX3O95343 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.85□□□□□ -1.95
SIX3O95343 SNRPGP9-201ENST00000456025 225 ntBASIC2.85□□□□□ -1.95
SIX3O95343 snoU109.1-201ENST00000459339 135 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MTCO2P29-201ENST00000465212 189 ntBASIC2.85□□□□□ -1.95
SIX3O95343 BET1P1-201ENST00000482276 359 ntBASIC2.85□□□□□ -1.95
SIX3O95343 RPS27AP10-201ENST00000496103 208 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 AC113155.1-201ENST00000511141 769 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC009812.2-201ENST00000517657 457 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.85□□□□□ -1.95
SIX3O95343 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.85□□□□□ -1.95
SIX3O95343 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.85□□□□□ -1.95
SIX3O95343 AC024619.4-201ENST00000580924 316 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MIR3682-201ENST00000581338 84 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MIR3162-201ENST00000581818 82 ntBASIC2.85□□□□□ -1.95
SIX3O95343 MIR4435-1-201ENST00000582552 80 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC009977.1-201ENST00000586015 570 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC068276.1-201ENST00000605793 379 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AL365204.3-201ENST00000612448 685 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC092140.2-201ENST00000618027 521 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC084035.1-201ENST00000634543 607 ntBASIC2.85□□□□□ -1.95
SIX3O95343 AC110994.2-201ENST00000635481 492 ntBASIC2.85□□□□□ -1.95
SIX3O95343 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SIX3O95343 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SIX3O95343 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.84□□□□□ -1.95
SIX3O95343 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
SIX3O95343 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SIX3O95343 RNU6-641P-201ENST00000384006 107 ntBASIC2.84□□□□□ -1.95
SIX3O95343 RNY3P10-201ENST00000384764 102 ntBASIC2.84□□□□□ -1.95
SIX3O95343 MIR504-201ENST00000385065 83 ntBASIC2.84□□□□□ -1.95
SIX3O95343 SNORA26.8-201ENST00000391306 124 ntBASIC2.84□□□□□ -1.95
SIX3O95343 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 BPY2DP-201ENST00000422208 265 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 AL513043.1-201ENST00000439124 535 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
SIX3O95343 DPPA3P1-201ENST00000448050 469 ntBASIC2.84□□□□□ -1.95
SIX3O95343 MTND3P7-201ENST00000474435 343 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC126182.1-201ENST00000478134 357 ntBASIC2.84□□□□□ -1.95
SIX3O95343 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
SIX3O95343 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.84□□□□□ -1.95
SIX3O95343 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.84□□□□□ -1.95
SIX3O95343 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 COX6CP5-201ENST00000527162 228 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AP002453.2-201ENST00000533503 320 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX3O95343 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SIX3O95343 MIR3167-201ENST00000579623 85 ntBASIC2.84□□□□□ -1.95
SIX3O95343 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms