Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 U3.22-201ENST00000391120 215 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 RPL23AP48-201ENST00000406913 488 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF40AO75400 RPL18P10-201ENST00000425606 538 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 MTND3P2-201ENST00000438452 342 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF40AO75400 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF40AO75400 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF40AO75400 NOTCH2P1-201ENST00000443481 624 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.88□□□□□ -1.63
PRPF40AO75400 AC103987.1-201ENST00000473394 348 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 AC023141.12-201ENST00000512399 199 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 IGKV2-38-201ENST00000517443 247 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
PRPF40AO75400 MIR4277-201ENST00000578298 84 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 AC005899.2-201ENST00000584353 90 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40AO75400 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40AO75400 AC007390.2-201ENST00000606229 3803 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PRPF40AO75400 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PRPF40AO75400 AC126755.2-208ENST00000327792 462 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AC138969.1-213ENST00000331436 462 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 RNA5SP447-201ENST00000363749 119 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 RNA5SP189-201ENST00000364920 115 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 RNA5SP167-201ENST00000365461 116 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 Y_RNA.463-201ENST00000384271 102 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 RNU6-790P-201ENST00000384479 105 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF40AO75400 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40AO75400 AC009237.8-201ENST00000445492 379 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 CECR9-201ENST00000453421 199 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AC005921.1-201ENST00000510589 286 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40AO75400 RNU6-470P-201ENST00000515954 104 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 SCARNA16.2-201ENST00000516520 172 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 RNU6-264P-201ENST00000517134 104 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40AO75400 AC023442.1-201ENST00000531247 422 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 DNAJC8P1-201ENST00000554535 372 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 AL360157.1-201ENST00000565962 87 ntBASIC4.87□□□□□ -1.63
PRPF40AO75400 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40AO75400 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF40AO75400 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40AO75400 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40AO75400 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40AO75400 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40AO75400 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MTND5P30-201ENST00000452896 1731 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MTND5P16-201ENST00000460269 1703 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40AO75400 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF40AO75400 RAD17P1-201ENST00000418130 2042 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 PNPT1P2-201ENST00000456768 2050 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MIR331-201ENST00000362302 94 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 RNU6-490P-201ENST00000362985 107 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 RNU6-1059P-201ENST00000363752 98 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 RNU6-331P-201ENST00000384724 107 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF40AO75400 AC113618.1-201ENST00000416747 285 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MCFD2P1-201ENST00000417812 300 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40AO75400 S100A11P1-201ENST00000477525 312 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF40AO75400 Y_RNA.720-201ENST00000517166 92 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AC090281.1-201ENST00000523019 276 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AC091516.1-201ENST00000549191 703 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AC109446.1-201ENST00000566172 220 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF40AO75400 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF40AO75400 AC007938.3-201ENST00000604965 623 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MIR6758-201ENST00000620653 63 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AL078596.1-201ENST00000624856 447 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AL732372.2-225ENST00000642124 456 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 MARK2P15-201ENST00000432204 2186 ntBASIC4.86□□□□□ -1.63
PRPF40AO75400 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40AO75400 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
PRPF40AO75400 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40AO75400 OR5P1P-201ENST00000299512 925 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 Y_RNA.252-201ENST00000364556 101 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 SNORA62-201ENST00000365493 153 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 RNU6-933P-201ENST00000384424 107 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF40AO75400 AC018865.2-201ENST00000423631 129 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF40AO75400 AC011742.1-201ENST00000431448 434 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 VDAC1P3-201ENST00000434069 851 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AL132765.1-201ENST00000434165 553 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40AO75400 AL583843.1-201ENST00000456070 346 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 MTND5P22-201ENST00000458380 195 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AP000873.1-201ENST00000463987 400 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 RPS23P3-201ENST00000470993 430 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 RPL31P13-201ENST00000484151 370 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.85□□□□□ -1.63
PRPF40AO75400 AC022493.2-201ENST00000506122 481 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 RNA5SP384-201ENST00000516615 116 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 RNA5SP165-201ENST00000517142 115 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms