Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC107401.1-201ENST00000503426 685 ntBASIC2.97□□□□□ -1.93
SSX4O60224 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
SSX4O60224 SNORD27.1-201ENST00000516319 72 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX4O60224 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX4O60224 AC068135.2-201ENST00000569293 1028 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC011471.1-201ENST00000585766 187 ntBASIC2.97□□□□□ -1.93
SSX4O60224 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX4O60224 BNIP3P9-201ENST00000603714 553 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AL391646.1-201ENST00000603860 190 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC007684.1-201ENST00000609671 477 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC025034.2-201ENST00000623264 286 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.97□□□□□ -1.93
SSX4O60224 AL356274.2-201ENST00000624379 3752 ntBASIC2.97□□□□□ -1.93
SSX4O60224 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
SSX4O60224 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX4O60224 API5P2-201ENST00000397055 1498 ntBASIC2.96□□□□□ -1.93
SSX4O60224 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.96□□□□□ -1.94
SSX4O60224 FRG1CP-201ENST00000358464 769 ntBASIC2.96□□□□□ -1.94
SSX4O60224 SNORA14A-201ENST00000364773 135 ntBASIC2.96□□□□□ -1.94
SSX4O60224 MIR128-1-201ENST00000384921 82 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX4O60224 MTATP6P18-201ENST00000417994 673 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX4O60224 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC022364.2-201ENST00000457963 554 ntBASIC2.96□□□□□ -1.94
SSX4O60224 MRPS17P3-201ENST00000465453 385 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX4O60224 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX4O60224 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX4O60224 SNORD59.2-201ENST00000516873 68 ntBASIC2.96□□□□□ -1.94
SSX4O60224 RNA5SP165-201ENST00000517142 115 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX4O60224 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.96□□□□□ -1.94
SSX4O60224 OR4R1P-201ENST00000529879 463 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSX4O60224 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX4O60224 AC025449.1-201ENST00000603896 529 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AL158032.1-201ENST00000605401 106 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC087241.4-201ENST00000612441 480 ntBASIC2.96□□□□□ -1.94
SSX4O60224 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX4O60224 AC012409.4-201ENST00000612923 249 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC084035.1-201ENST00000634543 607 ntBASIC2.96□□□□□ -1.94
SSX4O60224 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX4O60224 MAPK10-322ENST00000641485 4530 ntBASIC2.96□□□□□ -1.94
SSX4O60224 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.96□□□□□ -1.94
SSX4O60224 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX4O60224 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSX4O60224 MTND5P19-201ENST00000424872 1794 ntBASIC2.95□□□□□ -1.94
SSX4O60224 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
SSX4O60224 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX4O60224 MTND5P17-201ENST00000418405 1603 ntBASIC2.95□□□□□ -1.94
SSX4O60224 Y_RNA.1-201ENST00000352915 104 ntBASIC2.95□□□□□ -1.94
SSX4O60224 SNORA62.1-201ENST00000364287 154 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RNU6-198P-201ENST00000384258 104 ntBASIC2.95□□□□□ -1.94
SSX4O60224 Y_RNA.534-201ENST00000384599 112 ntBASIC2.95□□□□□ -1.94
SSX4O60224 MIR454-201ENST00000390180 115 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RNU2-9P-201ENST00000410194 145 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RNU4-55P-201ENST00000410731 137 ntBASIC2.95□□□□□ -1.94
SSX4O60224 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSX4O60224 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX4O60224 MTCO2P19-201ENST00000427513 598 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 RPL36AP53-201ENST00000432891 316 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RPS3AP14-201ENST00000483907 780 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RPL9P6-201ENST00000492764 598 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC079382.1-201ENST00000493346 557 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RBBP4P6-201ENST00000508098 202 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 RNU6-123P-201ENST00000516163 102 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RNU6-914P-201ENST00000516749 109 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
SSX4O60224 RNU6-143P-201ENST00000516942 93 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 OR5AL2P-201ENST00000532185 920 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 ADI1P3-201ENST00000549509 470 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.95□□□□□ -1.94
SSX4O60224 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX4O60224 MIR15A-201ENST00000607334 83 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AL359547.2-201ENST00000615810 418 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AL158209.2-201ENST00000619266 216 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC073476.4-201ENST00000628409 72 ntBASIC2.95□□□□□ -1.94
SSX4O60224 Z99571.1-201ENST00000636677 394 ntBASIC2.95□□□□□ -1.94
SSX4O60224 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX4O60224 AL359693.1-201ENST00000614959 2407 ntBASIC2.95□□□□□ -1.94
SSX4O60224 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SSX4O60224 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSX4O60224 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
SSX4O60224 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
SSX4O60224 AC103710.2-202ENST00000641454 2853 ntBASIC2.94□□□□□ -1.94
SSX4O60224 AC233263.6-201ENST00000631132 1963 ntBASIC2.94□□□□□ -1.94
SSX4O60224 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX4O60224 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.94□□□□□ -1.94
SSX4O60224 RNU6-1120P-201ENST00000362988 108 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms