Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORA36C-201ENST00000384289 132 ntBASIC3.31□□□□□ -1.88
LDB2O43679 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-387P-201ENST00000411331 105 ntBASIC3.31□□□□□ -1.88
LDB2O43679 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.31□□□□□ -1.88
LDB2O43679 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 AL158156.1-201ENST00000422509 473 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC018630.2-202ENST00000422992 927 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AL513185.2-201ENST00000425543 193 ntBASIC3.31□□□□□ -1.88
LDB2O43679 ZNF863P-201ENST00000426746 417 ntBASIC3.31□□□□□ -1.88
LDB2O43679 HMGB3P11-201ENST00000440127 604 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 USP9YP8-201ENST00000441913 500 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LDB2O43679 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 AP000852.1-201ENST00000472460 573 ntBASIC3.31□□□□□ -1.88
LDB2O43679 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB2O43679 RPL39P36-201ENST00000490784 156 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RPL23AP55-201ENST00000498163 452 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC008628.2-201ENST00000502605 298 ntBASIC3.31□□□□□ -1.88
LDB2O43679 MTCO2P30-201ENST00000503662 364 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC108078.2-201ENST00000510750 236 ntBASIC3.31□□□□□ -1.88
LDB2O43679 GMPSP1-201ENST00000514075 579 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC046134.1-201ENST00000514454 666 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RNU6-1231P-201ENST00000517185 103 ntBASIC3.31□□□□□ -1.88
LDB2O43679 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB2O43679 AC109635.4-202ENST00000531666 412 ntBASIC3.31□□□□□ -1.88
LDB2O43679 OR5B19P-201ENST00000531766 928 ntBASIC3.31□□□□□ -1.88
LDB2O43679 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB2O43679 MIR5195-201ENST00000583555 115 ntBASIC3.31□□□□□ -1.88
LDB2O43679 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC010525.2-201ENST00000590920 195 ntBASIC3.31□□□□□ -1.88
LDB2O43679 LARP7P1-201ENST00000605576 316 ntBASIC3.31□□□□□ -1.88
LDB2O43679 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
LDB2O43679 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 AC011155.2-201ENST00000623202 216 ntBASIC3.31□□□□□ -1.88
LDB2O43679 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB2O43679 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB2O43679 OR4G1P-203ENST00000641984 1631 ntBASIC3.3□□□□□ -1.88
LDB2O43679 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB2O43679 AP001350.1-201ENST00000601906 1524 ntBASIC3.3□□□□□ -1.88
LDB2O43679 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB2O43679 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LDB2O43679 AL354685.2-201ENST00000448218 1447 ntBASIC3.3□□□□□ -1.88
LDB2O43679 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LDB2O43679 MTND4P12-201ENST00000498999 1377 ntBASIC3.3□□□□□ -1.88
LDB2O43679 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RNU6-600P-201ENST00000362524 99 ntBASIC3.3□□□□□ -1.88
LDB2O43679 SNORD115-7-201ENST00000365306 82 ntBASIC3.3□□□□□ -1.88
LDB2O43679 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB2O43679 SNORA9-201ENST00000384215 133 ntBASIC3.3□□□□□ -1.88
LDB2O43679 SNORD37.1-201ENST00000390968 65 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RNU6-903P-201ENST00000391270 109 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB2O43679 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB2O43679 AC008850.1-201ENST00000427546 362 ntBASIC3.3□□□□□ -1.88
LDB2O43679 SRIP2-201ENST00000428470 166 ntBASIC3.3□□□□□ -1.88
LDB2O43679 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB2O43679 SNRPEP8-201ENST00000442866 260 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC020550.1-201ENST00000447385 163 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
LDB2O43679 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
LDB2O43679 PMCHL2-203ENST00000457791 237 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AL162395.1-201ENST00000457882 422 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RPS4XP13-201ENST00000483219 789 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC108860.1-201ENST00000484521 383 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC114786.4-201ENST00000508771 728 ntBASIC3.3□□□□□ -1.88
LDB2O43679 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
LDB2O43679 RNU4-29P-201ENST00000515943 174 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.3□□□□□ -1.88
LDB2O43679 AP006587.4-201ENST00000526053 529 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB2O43679 MIR5047-201ENST00000579212 100 ntBASIC3.3□□□□□ -1.88
LDB2O43679 UBE2V2P2-201ENST00000587677 504 ntBASIC3.3□□□□□ -1.88
LDB2O43679 BDH2P1-201ENST00000602288 736 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AL442067.2-201ENST00000614033 363 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB2O43679 AC104260.1-201ENST00000616660 539 ntBASIC3.3□□□□□ -1.88
LDB2O43679 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.3□□□□□ -1.88
LDB2O43679 AC007998.5-201ENST00000622938 237 ntBASIC3.3□□□□□ -1.88
LDB2O43679 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB2O43679 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB2O43679 AC103710.2-202ENST00000641454 2853 ntBASIC3.3□□□□□ -1.88
LDB2O43679 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
LDB2O43679 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB2O43679 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LDB2O43679 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LDB2O43679 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB2O43679 Y_RNA.576-201ENST00000384781 102 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC005019.1-201ENST00000436455 431 ntBASIC3.29□□□□□ -1.88
LDB2O43679 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms