Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORD26-201ENST00000384147 75 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-891P-201ENST00000384280 111 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 Z86062.1-201ENST00000406773 777 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU2-47P-201ENST00000410649 186 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 PIGPP2-201ENST00000411569 458 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 LUZP4P1-201ENST00000415420 344 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 PNRC2P1-201ENST00000423940 420 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RPL31P54-201ENST00000429803 370 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 Z82210.1-201ENST00000440037 231 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 PTENP1-201ENST00000447117 1215 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 OR2A41P-201ENST00000473586 105 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 HSPA8P13-201ENST00000523715 472 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 IMMP1LP2-201ENST00000552954 492 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RPS3AP4-201ENST00000555161 764 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC242628.1-201ENST00000606810 391 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 FTX_3.1-201ENST00000610451 147 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AL391597.1-201ENST00000618707 694 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AP003400.6-201ENST00000624698 740 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU1-17P-201ENST00000363022 152 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU4-62P-201ENST00000410125 130 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 BPY2DP-201ENST00000422208 265 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 MED14P1-201ENST00000430517 648 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 MTND2P29-201ENST00000438595 412 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC092393.1-201ENST00000439625 742 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC009238.1-201ENST00000442165 424 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC009237.6-201ENST00000446969 424 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RPS20P22-201ENST00000473700 357 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-1256P-201ENST00000516539 103 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-362P-201ENST00000516736 90 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 SNORA31.22-201ENST00000517204 135 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 ZNF705CP-201ENST00000530515 889 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 CR383656.7-201ENST00000548164 174 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC079148.1-201ENST00000565944 819 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC007151.1-201ENST00000572774 483 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 AC005832.2-201ENST00000538921 1430 ntBASIC0.79□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU5A-1-201ENST00000362698 116 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-152P-201ENST00000384037 107 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 MIR514A1-201ENST00000385133 98 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 RPS24P7-201ENST00000416921 246 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 EIF4EP2-201ENST00000422816 654 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 RPL39P29-201ENST00000447779 157 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 RFC5P1-201ENST00000454419 874 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 HMGN2P23-201ENST00000456759 269 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC022483.1-201ENST00000514020 567 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 DUSP12P1-201ENST00000612874 516 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 FRG1HP-204ENST00000617940 757 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC008443.7-201ENST00000622195 246 ntBASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV1-2A0A0B4J238 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA40.19-201ENST00000390846 128 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA17.3-201ENST00000391159 129 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR888-201ENST00000401186 77 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC018630.2-202ENST00000422992 927 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AL513124.1-201ENST00000450410 614 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 RPL26P9-201ENST00000457466 433 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC091917.2-201ENST00000505002 744 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 FAM206BP-201ENST00000510179 541 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC093752.1-206ENST00000511823 336 ntBASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV1-2A0A0B4J238 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms