Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC021382.1-201ENST00000483523 359 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC117532.1-201ENST00000514638 323 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 OR5B19P-201ENST00000531766 928 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 EEF1B2P4-201ENST00000551398 348 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 RPL21P5-201ENST00000554662 472 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AL356432.3-201ENST00000568952 465 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 DUXAP10-204ENST00000612052 616 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC009233.1-201ENST00000616477 371 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 AC024581.2-201ENST00000619986 252 ntBASIC0.86□□□□□ -2.27
AP4S1Q9Y587 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
AP4S1Q9Y587 Y_RNA.67-201ENST00000362870 100 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RNU6-457P-201ENST00000363999 107 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 U8.10-201ENST00000384260 133 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RNU6-441P-201ENST00000384545 106 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 MIR1289-2-201ENST00000408360 111 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RPS12P24-201ENST00000412619 387 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RPS6P15-201ENST00000431996 751 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 HMGN2P18-201ENST00000450680 270 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AC005908.1-201ENST00000468701 347 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RNU5A-7P-201ENST00000515979 116 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 RNU4-18P-201ENST00000516751 149 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 C1DP5-201ENST00000525775 383 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 MTND4LP5-201ENST00000605152 292 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 BX322635.1-201ENST00000605804 496 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AL121652.1-201ENST00000608851 448 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 AC013412.1-201ENST00000610687 192 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.85□□□□□ -2.27
AP4S1Q9Y587 MIR6130-201ENST00000619419 109 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 MTND5P9-201ENST00000503854 1755 ntBASIC0.85□□□□□ -2.27
AP4S1Q9Y587 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 RNA5SP126-201ENST00000365092 109 ntBASIC0.84□□□□□ -2.27
AP4S1Q9Y587 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 snoU109.4-201ENST00000458953 143 ntBASIC0.84□□□□□ -2.27
AP4S1Q9Y587 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC093677.1-201ENST00000514414 678 ntBASIC0.84□□□□□ -2.27
AP4S1Q9Y587 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AP000916.1-201ENST00000533869 835 ntBASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AL118508.4-201ENST00000624142 1176 ntBASIC0.84□□□□□ -2.27
AP4S1Q9Y587 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AC096649.2-201ENST00000416186 393 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 OOSP1P1-201ENST00000423265 274 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 RNU6-775P-201ENST00000459318 96 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 VPS26AP1-201ENST00000483197 979 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 DUXAP1-201ENST00000556632 463 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AC079148.1-201ENST00000565944 819 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AL158827.2-201ENST00000602494 330 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AC010738.1-201ENST00000604970 987 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AL512506.2-201ENST00000624472 458 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 AL691447.3-201ENST00000635020 330 ntBASIC0.83□□□□□ -2.28
AP4S1Q9Y587 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 RNU6-76P-201ENST00000384060 104 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 SNORA40.19-201ENST00000390846 128 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 NDUFB4P7-201ENST00000423198 363 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 RSU1P2-202ENST00000437884 485 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 BX322784.1-201ENST00000455793 1077 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 RNU7-95P-201ENST00000459222 64 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 snoU13.26-201ENST00000459452 105 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC112198.4-201ENST00000515450 351 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms