Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 RNU6-213P-201ENST00000384051 104 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 RNU6-1156P-201ENST00000410365 100 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 HSPE1P12-201ENST00000412576 301 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 RPL21P90-201ENST00000415692 466 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 BX276092.3-201ENST00000424182 230 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AL133396.1-201ENST00000432048 687 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC073063.1-201ENST00000434352 607 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC090774.1-201ENST00000435925 246 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AL031274.1-201ENST00000450334 232 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC022447.4-201ENST00000504053 364 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 RNU6-1095P-201ENST00000516148 108 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC104576.1-201ENST00000524225 88 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 AC007375.1-201ENST00000554513 578 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 RNU6-85P-201ENST00000605989 107 ntBASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RTCBQ9Y3I0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 RNU6-1155P-201ENST00000363554 107 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 Y_RNA.222-201ENST00000364264 102 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AL138885.1-201ENST00000405921 675 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 RNU6-174P-201ENST00000410406 106 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 MIR1911-201ENST00000410783 80 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 PPP1R11P2-201ENST00000423543 382 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 OR2AH1P-201ENST00000425717 928 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 CHEK2P4-201ENST00000450340 246 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AP000942.1-201ENST00000463969 747 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 RPL37P6-202ENST00000464216 403 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 FTH1P9-201ENST00000513251 355 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 SNORA31.3-201ENST00000516029 96 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 RNA5SP360-201ENST00000516555 118 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 OR5D17P-201ENST00000531492 978 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 MIR4472-2-201ENST00000582069 67 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AC012669.1-201ENST00000603209 283 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AC012468.1-201ENST00000604888 430 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 HMGB1P50-201ENST00000605814 607 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 SDR42E1P2-201ENST00000614861 481 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 AC103858.2-201ENST00000621471 543 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 U6.104-201ENST00000637979 90 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 EOGT-210ENST00000615922 1931 ntBASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.28□□□□□ -1.56
RTCBQ9Y3I0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 RNU6-263P-201ENST00000363811 107 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 RNU4-42P-201ENST00000364738 142 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 MT-TW-201ENST00000387382 68 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 SNORA68.2-201ENST00000391263 128 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 BX842559.1-201ENST00000419615 532 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 AC104164.2-201ENST00000496953 495 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 MIR3128-201ENST00000581957 66 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 AL512605.2-201ENST00000592972 256 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 MIR15A-201ENST00000607334 83 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 AL591516.1-201ENST00000611326 274 ntBASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RTCBQ9Y3I0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AL592182.3-201ENST00000642132 3304 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms