Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 EIF1AXP1-201ENST00000419267 435 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 RPL21P66-201ENST00000426566 466 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AL049745.1-201ENST00000433953 286 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AC078817.1-201ENST00000492623 435 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 RPL23AP49-201ENST00000492925 468 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 Vault.1-201ENST00000516474 102 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1012P-201ENST00000516606 109 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 SNORA43.2-201ENST00000516652 128 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1282P-201ENST00000516735 96 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 DEFB108E-201ENST00000524692 240 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 LINC00933-203ENST00000559812 219 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 RNF138P2-201ENST00000603490 592 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AC091953.3-201ENST00000623220 236 ntBASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXD3Q9UJU5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 Y_RNA.29-201ENST00000362570 113 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RN7SKP104-201ENST00000362605 328 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 SNORD115-32-201ENST00000364079 82 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RNU6-968P-201ENST00000384076 107 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1197P-201ENST00000391183 107 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 PPIAP31-201ENST00000405422 495 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC245028.1-201ENST00000423259 256 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AL139109.1-201ENST00000455491 297 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 COX6B1P5-201ENST00000509843 249 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1183P-201ENST00000517054 60 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC090281.1-201ENST00000523019 276 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC010201.1-201ENST00000605051 540 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 RMST_6.1-201ENST00000611980 203 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AC240442.1-201ENST00000616055 283 ntBASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
FOXD3Q9UJU5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 SDAD1P1-202ENST00000524156 2051 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNU6-1301P-201ENST00000362724 104 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNU6-527P-201ENST00000363425 104 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RN7SKP113-201ENST00000363891 295 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNU6-280P-201ENST00000364145 104 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNA5SP87-201ENST00000384155 118 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNU6-17P-201ENST00000384245 107 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RNU6-18P-201ENST00000384527 107 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AL603910.2-201ENST00000407268 136 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RAB9AP3-201ENST00000412737 573 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RPL26P27-201ENST00000414397 437 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 RAB9AP1-201ENST00000449393 573 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 TOMM22P6-201ENST00000465035 409 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC140172.1-201ENST00000502928 141 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 IGKV1-32-201ENST00000519290 311 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AC107016.1-201ENST00000550463 337 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 AL390726.5-202ENST00000564800 256 ntBASIC4.55□□□□□ -1.68
FOXD3Q9UJU5 ZNF192P1-203ENST00000565888 810 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms