Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.36□□□□□ -1.71
PUF60Q9UHX1 AC012442.3-202ENST00000636742 206 ntBASIC4.36□□□□□ -1.71
PUF60Q9UHX1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PUF60Q9UHX1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PUF60Q9UHX1 AL353746.1-201ENST00000566293 6881 ntBASIC4.36□□□□□ -1.71
PUF60Q9UHX1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.36□□□□□ -1.71
PUF60Q9UHX1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC009812.4-201ENST00000569134 1805 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 Y_RNA.146-201ENST00000363549 102 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 RNU6-637P-201ENST00000384050 107 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 RNU2-29P-201ENST00000410423 189 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 YME1L1P1-201ENST00000429435 297 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AL358472.1-201ENST00000431295 329 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 RPL23AP11-201ENST00000475260 469 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AL163540.1-201ENST00000485382 386 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC090096.1-201ENST00000489168 390 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 MTCO1P29-201ENST00000496868 288 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 VN1R104P-201ENST00000505115 1009 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC026726.1-201ENST00000512859 601 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 Y_RNA.682-201ENST00000516457 100 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 RNU6-273P-201ENST00000516937 96 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AL163153.1-201ENST00000554223 283 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AL133153.1-201ENST00000557756 303 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 BNIP3P25-201ENST00000596023 559 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC004908.2-201ENST00000609090 574 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 MIR6868-201ENST00000611215 58 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 XIST_intron.1-201ENST00000619444 68 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 AC011155.2-201ENST00000623202 216 ntBASIC4.35□□□□□ -1.71
PUF60Q9UHX1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.35□□□□□ -1.71
PUF60Q9UHX1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RNU6-254P-201ENST00000363377 107 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RNA5SP387-201ENST00000364226 106 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 Y_RNA.530-201ENST00000384587 101 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RNU6-278P-201ENST00000390945 109 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RNY4P36-201ENST00000391116 96 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 MTHFD2P2-201ENST00000407725 247 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 HMGN1P24-201ENST00000412282 298 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RAB9AP3-201ENST00000412737 573 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RPL7AP73-201ENST00000413490 353 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 VN1R36P-201ENST00000414936 291 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC114491.1-201ENST00000416095 246 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 MTND3P2-201ENST00000438452 342 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC020550.1-201ENST00000447385 163 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RAB9AP1-201ENST00000449393 573 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 HMGN2P16-201ENST00000456802 261 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 Y_RNA.635-201ENST00000459041 101 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AL049830.2-201ENST00000480072 201 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 HMGB3P15-201ENST00000507326 574 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 RNU2-10P-201ENST00000516375 211 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC091516.1-201ENST00000549191 703 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AL450472.3-201ENST00000615578 367 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AL391261.4-201ENST00000616012 481 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 MTCO1P12-201ENST00000414273 1543 ntBASIC4.34□□□□□ -1.71
PUF60Q9UHX1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PUF60Q9UHX1 AL672296.1-201ENST00000427780 2158 ntBASIC4.34□□□□□ -1.72
PUF60Q9UHX1 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.34□□□□□ -1.72
PUF60Q9UHX1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.34□□□□□ -1.72
PUF60Q9UHX1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PUF60Q9UHX1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PUF60Q9UHX1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PUF60Q9UHX1 RNU6-1252P-201ENST00000363054 104 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.202-201ENST00000364083 110 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 RNU6-188P-201ENST00000364207 107 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.333-201ENST00000365274 102 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 DEFB109C-201ENST00000382575 264 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 DEFB109B-201ENST00000382656 264 ntBASIC4.33□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.422-201ENST00000384054 114 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms