Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 Y_RNA.608-201ENST00000410647 95 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 OOSP1P1-201ENST00000423265 274 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC092427.1-202ENST00000430569 476 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 MYL8P-204ENST00000431574 518 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 MTND1P28-201ENST00000435623 950 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 Z83846.1-201ENST00000446798 265 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC112204.1-201ENST00000502591 103 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC008413.1-201ENST00000511864 177 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 FABP5P5-201ENST00000515537 406 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 RNA5SP471-201ENST00000516971 106 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 RNU6-201P-201ENST00000517100 61 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 RNU6-840P-201ENST00000517275 65 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AP003181.2-201ENST00000528941 181 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC243972.3-201ENST00000539655 198 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC091544.4-201ENST00000555268 342 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC027176.1-201ENST00000560204 514 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 ACTR3BP3-201ENST00000565577 979 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 MIR3945-201ENST00000581853 98 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AL358072.1-201ENST00000604156 575 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC112191.3-201ENST00000604371 277 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AP002826.1-201ENST00000608835 315 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC004908.2-201ENST00000609090 574 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 TUG1_2.1-201ENST00000614234 87 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 Z69908.1-201ENST00000622603 247 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC025048.6-202ENST00000627667 438 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AC110079.1-202ENST00000635213 138 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.53□□□□□ -2.01
APOBEC3BQ9UH17 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RNU5A-8P-201ENST00000364102 114 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RNY4P16-201ENST00000364768 94 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RNY3P10-201ENST00000384764 102 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RN7SKP284-201ENST00000411002 343 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RN7SKP142-201ENST00000411236 328 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RPL27AP8-201ENST00000424277 446 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL353777.1-201ENST00000425552 326 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC008850.1-201ENST00000427546 362 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RPL35AP22-201ENST00000436855 335 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC011816.1-201ENST00000441346 546 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 SNRPGP6-201ENST00000451124 220 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC092798.1-201ENST00000458542 409 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RNU7-59P-201ENST00000459101 61 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL049714.1-201ENST00000466686 347 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC128713.1-201ENST00000471495 306 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RN7SL297P-201ENST00000483161 293 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC117522.2-201ENST00000510049 657 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 OR5BM1P-201ENST00000512021 366 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 MTND5P13-201ENST00000513046 1079 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 HMGN1P28-201ENST00000521340 364 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC107934.1-201ENST00000522215 217 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AP003122.4-201ENST00000530980 758 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AP002770.2-201ENST00000543613 532 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL512310.1-201ENST00000548639 172 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC009163.5-201ENST00000575421 637 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC103810.1-201ENST00000579873 453 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AF038458.1-201ENST00000588406 262 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AP000254.1-201ENST00000609934 520 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC245517.5-201ENST00000611529 162 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC093838.1-201ENST00000613014 469 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AL158063.1-201ENST00000615349 536 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
APOBEC3BQ9UH17 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms