Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RPL26P9-201ENST00000457466 433 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC092798.1-201ENST00000458542 409 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 HMGN2P13-201ENST00000476476 274 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 RPL21P13-201ENST00000488305 481 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 MIR2116-201ENST00000517221 80 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL391261.3-201ENST00000557194 520 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 MIR4697-201ENST00000582977 78 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AL355598.1-201ENST00000604169 202 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 AC012468.1-201ENST00000604888 430 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 RNU4-89P-201ENST00000607443 133 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 FAM35DP-201ENST00000323387 2712 ntBASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIN7CQ9NUP9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LIN7CQ9NUP9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 FRG1CP-201ENST00000358464 769 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 RNU6-198P-201ENST00000384258 104 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 RNU6-166P-201ENST00000384371 107 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 HMGN2P8-201ENST00000391458 268 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL356057.2-201ENST00000403318 432 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 RNU6-607P-201ENST00000411283 108 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL592148.1-201ENST00000413568 445 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 RPL26P27-201ENST00000414397 437 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL078601.1-201ENST00000444542 271 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 RPL37P4-201ENST00000448908 268 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC007547.1-201ENST00000462177 490 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 HMGB1P30-201ENST00000492455 606 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 MTCO2P30-201ENST00000503662 364 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC098799.2-201ENST00000509466 868 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC025884.1-201ENST00000556034 378 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC018638.8-201ENST00000588755 281 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 Z82243.1-201ENST00000609432 473 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AC103705.1-201ENST00000619013 241 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AL031601.2-202ENST00000622650 282 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 AP004289.2-201ENST00000444413 1457 ntBASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIN7CQ9NUP9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 MTND5P7-201ENST00000413558 1798 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 SRP72P2-201ENST00000344851 1979 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RNU1-18P-201ENST00000363062 164 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 SNORA32.2-201ENST00000384049 122 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 HLFP1-201ENST00000402375 499 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RNU2-3P-201ENST00000410144 191 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RNU6-1148P-201ENST00000410992 104 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 AC009161.1-201ENST00000417306 376 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 AL714022.1-201ENST00000439897 151 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 MTATP6P7-201ENST00000453315 681 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RPS27AP10-201ENST00000496103 208 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 MIR892C-201ENST00000516410 77 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 SNORA20.3-201ENST00000516880 132 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.26□□□□□ -1.89
LIN7CQ9NUP9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms