Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ARL2BPP2-201ENST00000550907 489 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 SNRPGP1-201ENST00000553864 222 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC005951.2-201ENST00000576282 495 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.54□□□□□ -2.16
VCX3BQ9H321 VN1R87P-201ENST00000596706 487 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC005776.1-201ENST00000603164 290 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AL390208.1-201ENST00000605885 644 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC026790.2-201ENST00000606282 430 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC009233.1-201ENST00000616477 371 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AL603758.1-201ENST00000618654 241 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 AC120349.2-201ENST00000625002 298 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 MTCO1P9-201ENST00000505577 1534 ntBASIC1.54□□□□□ -2.16
VCX3BQ9H321 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
VCX3BQ9H321 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
VCX3BQ9H321 AL356967.1-201ENST00000406305 431 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC008850.1-201ENST00000427546 362 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC098831.1-201ENST00000440661 216 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC022861.1-201ENST00000522981 663 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AP005597.4-201ENST00000526762 229 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC090615.1-201ENST00000577519 154 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3BQ9H321 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AL158211.4-201ENST00000606988 584 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC009974.1-201ENST00000608881 455 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.15-201ENST00000611544 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.16-201ENST00000613119 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 uc_338.14-201ENST00000613162 166 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.12-201ENST00000613778 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.20-201ENST00000613956 192 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AL118556.2-201ENST00000614375 824 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.9-201ENST00000615427 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.11-201ENST00000616345 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.2-201ENST00000616535 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.3-201ENST00000617785 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.19-201ENST00000618602 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 RNU2-1-201ENST00000618664 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.6-201ENST00000619225 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.5-201ENST00000619465 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 U2.10-201ENST00000620268 191 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC002550.2-201ENST00000621246 394 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AL159972.1-201ENST00000625150 448 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 AC091948.2-201ENST00000636510 279 ntBASIC1.53□□□□□ -2.16
VCX3BQ9H321 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC110491.1-201ENST00000562191 2010 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 CDC27P3-201ENST00000635418 1910 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC107982.1-201ENST00000507171 1300 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 RNU1-62P-201ENST00000362599 164 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 Y_RNA.234-201ENST00000364409 97 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VCX3BQ9H321 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 RNU6-338P-201ENST00000383888 105 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 SNORA64-201ENST00000384674 134 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AL079342.1-201ENST00000401460 267 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AL109755.1-201ENST00000401791 649 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AL079342.2-201ENST00000403367 482 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MIR1294-201ENST00000408503 142 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 RNU2-33P-201ENST00000410344 192 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AL139421.1-201ENST00000423010 169 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 Z98742.2-201ENST00000431564 187 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC079776.3-201ENST00000450665 370 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 RPS3AP14-201ENST00000483907 780 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC114801.2-201ENST00000503825 781 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AP003122.3-201ENST00000526316 255 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MTCO3P15-201ENST00000526563 574 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MIR3944-201ENST00000581277 108 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC011451.2-201ENST00000604303 598 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 AC005332.6-201ENST00000613178 446 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3BQ9H321 MIR5739-201ENST00000619803 80 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 AP003485.2-201ENST00000623636 610 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MIR4275-201ENST00000636486 87 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
VCX3BQ9H321 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 RNU6-28P-201ENST00000362378 107 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms