Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL136981.2-201ENST00000617319 734 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXC2Q99958 AP002782.1-201ENST00000623107 614 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
FOXC2Q99958 RNU6-433P-201ENST00000363216 104 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC119751.3-201ENST00000399720 670 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXC2Q99958 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXC2Q99958 USP9YP33-201ENST00000412220 421 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 BPY2DP-201ENST00000422208 265 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXC2Q99958 USP9YP35-201ENST00000435696 412 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC104389.3-201ENST00000445629 235 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 PAXBP1P1-201ENST00000449315 447 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXC2Q99958 MTND2P14-201ENST00000482139 351 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC105252.1-201ENST00000503089 286 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 NDUFB4P2-201ENST00000509515 391 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC112673.1-201ENST00000513168 575 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 RNU5F-8P-201ENST00000515941 111 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC023538.1-201ENST00000534576 736 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 MIR4999-201ENST00000585029 91 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AL357094.1-201ENST00000603845 844 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC016727.1-205ENST00000605437 569 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AL355493.4-201ENST00000618530 292 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC068057.2-201ENST00000624047 895 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 AC079228.1-201ENST00000624774 1049 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AC010329.5-201ENST00000623497 2174 ntBASIC2.14□□□□□ -2.07
FOXC2Q99958 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
FOXC2Q99958 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXC2Q99958 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
FOXC2Q99958 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
FOXC2Q99958 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC092881.1-201ENST00000638218 2733 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
FOXC2Q99958 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
FOXC2Q99958 RNU6-462P-201ENST00000362659 105 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 RNU6-1214P-201ENST00000363650 109 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 RNU6-777P-201ENST00000364265 104 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 MIR181A2-201ENST00000384863 110 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 RNU2-49P-201ENST00000410666 184 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC096649.2-201ENST00000416186 393 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 USP12PX-201ENST00000432383 1057 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 MTCO3P45-201ENST00000443036 613 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC096638.1-201ENST00000444678 216 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 OSTCP8-201ENST00000445117 448 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 COX6CP12-201ENST00000446748 202 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC013267.1-201ENST00000458227 267 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 RN7SL297P-201ENST00000483161 293 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 SRIP1-201ENST00000489235 288 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
FOXC2Q99958 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC022447.1-201ENST00000515358 464 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 RNU6-927P-201ENST00000516199 100 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 SNORA9.3-201ENST00000516383 129 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.13□□□□□ -2.07
FOXC2Q99958 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 MTATP6P24-201ENST00000576835 677 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 MIR5194-201ENST00000582634 120 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXC2Q99958 MIR4635-201ENST00000583759 79 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 AP000403.1-201ENST00000603349 851 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 SNHG22-203ENST00000617833 660 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 AC006020.1-201ENST00000420179 1854 ntBASIC2.13□□□□□ -2.07
FOXC2Q99958 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
FOXC2Q99958 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXC2Q99958 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms