Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL358232.1-201ENST00000448030 501 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AMD1P1-201ENST00000457220 922 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC091179.1-201ENST00000461606 579 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.28□□□□□ -1.88
PKP4Q99569 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP4Q99569 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.28□□□□□ -1.88
PKP4Q99569 MTND3P22-201ENST00000510932 243 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 SNORA40.12-201ENST00000516329 111 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 RNU6-410P-201ENST00000517006 107 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 OR4R1P-201ENST00000529879 463 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.28□□□□□ -1.88
PKP4Q99569 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP4Q99569 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.28□□□□□ -1.88
PKP4Q99569 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.28□□□□□ -1.88
PKP4Q99569 AC098848.2-201ENST00000588023 330 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC005261.5-201ENST00000596280 355 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AL353621.2-201ENST00000605340 133 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AL590099.1-201ENST00000615276 138 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AL355365.1-201ENST00000616480 294 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC006504.8-201ENST00000621046 635 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC112204.3-201ENST00000623822 332 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 AC024614.3-201ENST00000637860 256 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP4Q99569 ZNF680P1-201ENST00000436625 1469 ntBASIC3.28□□□□□ -1.88
PKP4Q99569 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKP4Q99569 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC058791.1-201ENST00000608412 3198 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 AL049781.1-201ENST00000623195 3585 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PKP4Q99569 MT-TD-201ENST00000387419 68 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PKP4Q99569 RNU6-1158P-201ENST00000391167 107 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RNU2-9P-201ENST00000410194 145 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RNU2-62P-201ENST00000410868 191 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RNU6-55P-201ENST00000411092 107 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RNU6-954P-201ENST00000411355 107 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.27□□□□□ -1.89
PKP4Q99569 RPL23AP30-201ENST00000432419 501 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
PKP4Q99569 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RPS15AP9-201ENST00000439856 381 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 RPL26P6-201ENST00000440913 438 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 BNIP3P2-201ENST00000441221 577 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC016691.1-201ENST00000441321 413 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC092001.1-201ENST00000453012 261 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 MTND1P9-201ENST00000453775 944 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC234775.1-201ENST00000454247 670 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC108059.3-201ENST00000456388 214 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC091153.1-201ENST00000466297 402 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC034236.1-201ENST00000469891 373 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 MTCO2P30-201ENST00000503662 364 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.27□□□□□ -1.89
PKP4Q99569 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 RMST_3.1-201ENST00000611651 109 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 AC024940.5-201ENST00000622889 474 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC093648.1-201ENST00000623546 606 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKP4Q99569 SDAD1P2-201ENST00000441308 2028 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
PKP4Q99569 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PKP4Q99569 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKP4Q99569 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
PKP4Q99569 OR1S2-201ENST00000302592 978 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 RNA5SP119-201ENST00000362715 117 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 Y_RNA.72-201ENST00000362894 103 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 Y_RNA.86-201ENST00000363020 111 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 Y_RNA.263-201ENST00000364659 114 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 AP002088.1-201ENST00000382740 395 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 RNU6-76P-201ENST00000384060 104 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 Y_RNA.548-201ENST00000384656 105 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 MIR19A-201ENST00000384878 82 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 RNA5SP171-201ENST00000391071 115 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 OR9R1P-201ENST00000412200 877 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 HMGN1P24-201ENST00000412282 298 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.26□□□□□ -1.89
PKP4Q99569 AC090774.1-201ENST00000435925 246 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.26□□□□□ -1.89
PKP4Q99569 AC093019.1-201ENST00000443135 252 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PKP4Q99569 CYCSP35-201ENST00000451978 304 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 RPS20P20-201ENST00000460498 340 ntBASIC3.26□□□□□ -1.89
PKP4Q99569 AL049714.1-201ENST00000466686 347 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms