Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 MTND6P13-201ENST00000443510 523 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AL671855.1-201ENST00000446875 1203 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC074250.1-201ENST00000511117 192 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AF131216.2-201ENST00000512316 564 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC008885.1-201ENST00000514930 301 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP337-201ENST00000517007 109 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC090136.1-201ENST00000520009 240 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC022634.1-201ENST00000520765 532 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC008088.1-201ENST00000580993 280 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC009977.1-201ENST00000586015 570 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 HMGN1P30-201ENST00000589286 268 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC012493.2-201ENST00000595083 291 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AP001981.2-201ENST00000603241 418 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 DPPA3P3-201ENST00000603842 430 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC025811.1-201ENST00000604312 472 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC012468.1-201ENST00000604888 430 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 DUSP12P1-201ENST00000612874 516 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC007998.5-201ENST00000622938 237 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC097520.1-201ENST00000624435 385 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC025048.6-202ENST00000627667 438 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC092593.1-201ENST00000515413 1815 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 Z82209.1-201ENST00000422141 2135 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC096644.4-201ENST00000563417 2912 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 FGF7P2-201ENST00000332473 296 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNU6-778P-201ENST00000363269 103 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNU1-105P-201ENST00000363470 161 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 SMIM11P1-201ENST00000369586 178 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNVU1-14-201ENST00000384770 164 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 SNORA26.8-201ENST00000391306 124 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RPL23AP32-201ENST00000395315 459 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AL021407.1-201ENST00000404531 386 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNU2-8P-201ENST00000410727 190 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 SNORD42A-201ENST00000459584 64 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 MRPS17P3-201ENST00000465453 385 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC006445.1-201ENST00000491925 405 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP471-201ENST00000516971 106 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AP003072.2-201ENST00000527756 676 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AP003181.2-201ENST00000528941 181 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC104763.2-201ENST00000604179 382 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC007363.1-201ENST00000604736 620 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC007619.2-201ENST00000605743 379 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AP002360.4-201ENST00000606980 481 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC006338.1-201ENST00000618453 749 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC078883.4-201ENST00000623218 367 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 MTND5P42-201ENST00000637720 498 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 AC000403.1-201ENST00000613696 3585 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 ELF2P3-201ENST00000445099 1506 ntBASIC2.17□□□□□ -2.06
RPUSD4Q96CM3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
RPUSD4Q96CM3 UBE2L2-201ENST00000254302 429 ntBASIC2.16□□□□□ -2.06
RPUSD4Q96CM3 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
RPUSD4Q96CM3 RNU5F-7P-201ENST00000363696 115 ntBASIC2.16□□□□□ -2.06
RPUSD4Q96CM3 RNU6-701P-201ENST00000384059 107 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms