Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AL159987.2-201ENST00000432754 307 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AL162395.1-201ENST00000457882 422 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 GMFBP1-201ENST00000467831 427 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 KC877373.1-201ENST00000479066 408 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 RNU6-123P-201ENST00000516163 102 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 RNU6-143P-201ENST00000516942 93 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 RNA5SP290-201ENST00000517133 127 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC092325.1-201ENST00000566449 554 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 MIR3944-201ENST00000581277 108 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC098826.3-201ENST00000603823 466 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AL670379.4-201ENST00000605279 254 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC008945.2-201ENST00000606056 604 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AP001486.3-201ENST00000615334 372 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 XIST_intron.1-201ENST00000619444 68 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 U6.98-201ENST00000637157 84 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 CUL1P1-201ENST00000509510 2425 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC010733.2-201ENST00000589496 5702 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC006020.1-201ENST00000420179 1854 ntBASIC4.15□□□□□ -1.74
CHMP4CQ96CF2 ZNF807-201ENST00000328088 1707 ntBASIC4.15□□□□□ -1.74
CHMP4CQ96CF2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CHMP4CQ96CF2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CHMP4CQ96CF2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.245-201ENST00000364493 95 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 Y_RNA.255-201ENST00000364581 97 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 Y_RNA.256-201ENST00000364594 104 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 RNU6-877P-201ENST00000383868 107 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 SNORD37.1-201ENST00000390968 65 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 SNORA11.1-201ENST00000408133 129 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 RNA5SP111-201ENST00000411386 101 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 MTCYBP8-201ENST00000422855 651 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AP000907.1-201ENST00000428428 510 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 ATP5JP1-201ENST00000431631 322 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC000111.3-201ENST00000433478 193 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AL596276.1-201ENST00000434465 418 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 FGF7P6-202ENST00000451282 293 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 RNA5SP310-201ENST00000459084 116 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC008155.2-201ENST00000464337 397 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC084357.1-201ENST00000473404 255 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 RPL39P36-201ENST00000490784 156 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 TRAV28-201ENST00000557548 323 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 MIR4703-201ENST00000577728 79 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 BNIP3P9-201ENST00000603714 553 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AL356321.1-201ENST00000621360 228 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 YWHAEP7-203ENST00000622054 312 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 MTND1P37-201ENST00000636562 264 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 CKAP2P1-201ENST00000555477 2049 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 MAPK10-362ENST00000641864 4484 ntBASIC4.15□□□□□ -1.75
CHMP4CQ96CF2 AC017071.1-201ENST00000564407 2204 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 FAM35BP-202ENST00000497389 3337 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 RNU6-512P-201ENST00000364438 103 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MIR184-201ENST00000384962 84 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MIR325-201ENST00000385260 98 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AP000567.1-201ENST00000406413 156 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 RN7SKP111-201ENST00000410349 271 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 RNU2-29P-201ENST00000410423 189 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 USP9YP6-201ENST00000413550 854 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AL512844.2-201ENST00000433990 593 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 Z82210.1-201ENST00000440037 231 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 DPPA3P1-201ENST00000448050 469 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 CACYBPP2-201ENST00000453625 678 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC006539.3-201ENST00000454258 129 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 BX510359.1-201ENST00000456973 237 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MTCO3P38-201ENST00000468910 766 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 RBBP4P6-201ENST00000508098 202 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC010265.1-201ENST00000513509 211 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 APOOP4-201ENST00000513530 597 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 RNA5SP471-201ENST00000516971 106 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms