Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 EEF1B2P4-201ENST00000551398 348 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 MIR26B-201ENST00000362251 77 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 NUP35P2-201ENST00000416748 943 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 RABEPKP1-201ENST00000440529 1026 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 EIF4EP3-201ENST00000498782 656 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 CIR1P1-201ENST00000524055 1133 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AL050343.2-201ENST00000607338 280 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 RNU6-105P-201ENST00000363909 104 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 SNORD26-201ENST00000384147 75 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 RNU6-35P-201ENST00000384530 107 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 HNRNPDP2-201ENST00000406475 478 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC019070.1-201ENST00000415008 1024 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AL356320.2-201ENST00000417263 507 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AL353718.1-201ENST00000451028 517 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC087343.1-201ENST00000477341 475 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AL132857.1-201ENST00000555180 708 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC019131.2-201ENST00000609071 870 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 MIR126-201ENST00000362291 85 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 RNU11-2P-201ENST00000516898 142 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AL355472.4-201ENST00000610233 626 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 MTND4P31-201ENST00000425607 1343 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 ZNF29P-201ENST00000225587 168 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 RNU2-19P-201ENST00000517288 84 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AP004371.1-201ENST00000525240 214 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC069304.3-201ENST00000603938 1084 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AL031775.1-201ENST00000607014 887 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 AC096586.2-201ENST00000610260 441 ntBASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.63□□□□□ -2.31
ALMS1Q8TCU4 U3.29-201ENST00000391296 212 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 RPS3AP24-201ENST00000407896 734 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 DBF4P1-201ENST00000412976 1892 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 CST2P1-201ENST00000425770 87 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC009296.1-201ENST00000443146 155 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 RPS29P28-201ENST00000446439 141 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 RNA5SP330-201ENST00000517096 96 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AL592148.2-201ENST00000612210 372 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 MIR7515-201ENST00000637837 67 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 MIR676-201ENST00000390702 67 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 MRPS36P1-201ENST00000421291 307 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 USP9YP33-201ENST00000412220 421 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC139453.3-201ENST00000493276 369 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC112198.4-201ENST00000515450 351 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 HSPE1P4-201ENST00000550617 308 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 AC087588.2-201ENST00000617667 426 ntBASIC0.62□□□□□ -2.31
ALMS1Q8TCU4 RNU6-837P-201ENST00000391056 108 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 MIR6086-201ENST00000638065 55 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 RPL30P13-201ENST00000418873 348 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AC005908.1-201ENST00000468701 347 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 MRPS33P3-201ENST00000513456 322 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AP005639.2-201ENST00000527592 928 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AC074051.3-201ENST00000570238 358 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 UCA1.1-201ENST00000620952 75 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 RNU6-222P-201ENST00000362438 107 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 Z86062.1-201ENST00000406773 777 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 TPTE2P6-202ENST00000445572 1007 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 SYPL1P1-201ENST00000473622 768 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AC015908.1-201ENST00000478739 476 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AK3P2-201ENST00000507976 429 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 PRR13P7-201ENST00000605538 430 ntBASIC0.61□□□□□ -2.31
ALMS1Q8TCU4 RNU6-666P-201ENST00000363499 107 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC004022.2-201ENST00000413824 193 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms