Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.97□□□□□ -2.09
LINC01560Q8TB33 AC079395.3-201ENST00000615161 484 ntBASIC1.97□□□□□ -2.09
LINC01560Q8TB33 AC091965.5-201ENST00000624785 342 ntBASIC1.97□□□□□ -2.09
LINC01560Q8TB33 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LINC01560Q8TB33 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 Y_RNA.18-201ENST00000362461 102 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 VTRNA1-1-201ENST00000363120 99 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RNA5SP139-201ENST00000364340 117 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RNU1-51P-201ENST00000365345 176 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RNU6-140P-201ENST00000384566 108 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC098592.1-201ENST00000419352 333 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 XKRYP1-201ENST00000423438 492 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 ZNF863P-201ENST00000426746 417 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 USP12PX-201ENST00000432383 1057 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC010153.1-201ENST00000432862 727 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 XKRYP2-201ENST00000432915 492 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC018634.1-201ENST00000437554 401 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RPL23AP20-201ENST00000447965 421 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RPL12P25-201ENST00000455592 494 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RNU7-23P-201ENST00000459465 62 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 OR5BM1P-201ENST00000512021 366 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 RNU6-64P-201ENST00000517119 105 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 MTATP6P15-201ENST00000527233 835 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AP003461.1-201ENST00000528866 78 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AP000907.2-201ENST00000530827 353 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 DEFB122-202ENST00000569013 197 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC020895.1-201ENST00000595362 272 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC068790.3-201ENST00000602988 553 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 DUXAP4-201ENST00000603046 613 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL161729.4-201ENST00000604650 476 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL136363.1-201ENST00000605349 337 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AL391813.2-201ENST00000609113 322 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AP000240.1-201ENST00000609910 452 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC021755.4-201ENST00000616620 456 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC241585.2-209ENST00000638217 143 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 AC022336.2-201ENST00000568966 2538 ntBASIC1.96□□□□□ -2.1
LINC01560Q8TB33 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01560Q8TB33 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 Y_RNA.97-201ENST00000363094 102 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AL359634.1-202ENST00000404721 284 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 MTCO1P42-201ENST00000457379 726 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 MTND4LP3-201ENST00000468320 276 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC072039.1-201ENST00000477611 581 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 RPS29P20-201ENST00000489592 171 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 SUMO2P6-201ENST00000505273 288 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 HMGB1P41-201ENST00000520234 440 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 ELOCP32-201ENST00000548625 324 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 ISCA1P3-201ENST00000577104 373 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AP001004.1-201ENST00000582468 324 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 HMGN2P15-201ENST00000585707 270 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC022022.2-201ENST00000602989 360 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 FTX_3.1-201ENST00000610451 147 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC104237.2-201ENST00000612456 443 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC068880.5-201ENST00000624331 290 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 PISRT1-201ENST00000626175 531 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC092192.1-201ENST00000633154 1018 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AC007671.2-201ENST00000637344 619 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms