Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP269-201ENST00000459032 137 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL160314.1-201ENST00000490836 438 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC113155.1-201ENST00000511141 769 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC137800.2-201ENST00000574375 120 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC004805.2-201ENST00000605382 482 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC069200.1-201ENST00000609511 323 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 FTX_3.1-201ENST00000610451 147 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL162274.2-201ENST00000614406 332 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 uc_338.12-201ENST00000616344 181 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC026422.1-201ENST00000623961 452 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AL603839.4-201ENST00000624658 1005 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC099654.13-201ENST00000639774 207 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 MTCO1P12-201ENST00000414273 1543 ntBASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC71LQ8N9Z2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RNY4P34-201ENST00000364779 95 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD116-9-201ENST00000384000 95 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD116-3-201ENST00000384287 95 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD116-7-201ENST00000384404 95 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD116-5-201ENST00000384462 95 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 MIR7-3-201ENST00000384898 110 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RPS3AP3-201ENST00000411933 242 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC007283.2-201ENST00000424739 197 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC093106.2-201ENST00000428212 385 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL159987.2-201ENST00000432754 307 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 MTCO2P16-201ENST00000436962 677 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RPS15AP7-201ENST00000439294 405 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 Z83846.1-201ENST00000446798 265 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL358232.1-201ENST00000448030 501 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL033528.1-201ENST00000453780 140 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SNRPFP4-201ENST00000456366 242 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RPL31P3-201ENST00000458430 332 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 MRPS17P3-201ENST00000465453 385 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RBM43P1-201ENST00000476891 1081 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 RPL31P41-201ENST00000477967 372 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC083906.5-201ENST00000503722 328 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC010587.1-201ENST00000505809 469 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 TBCAP3-201ENST00000512475 312 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AP003467.2-201ENST00000520175 319 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AP002453.2-201ENST00000533503 320 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC010546.1-201ENST00000569391 485 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 OR1M4P-201ENST00000589199 287 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC119751.7-201ENST00000600494 245 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC073544.2-201ENST00000601155 540 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL356575.1-201ENST00000603008 283 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SEPT7P9-203ENST00000604116 343 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AL161729.4-201ENST00000604650 476 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC025594.3-201ENST00000613068 790 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 AC004852.3-201ENST00000614131 326 ntBASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC71LQ8N9Z2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 GNG5P1-201ENST00000255500 204 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-1167P-201ENST00000363227 94 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 Y_RNA.245-201ENST00000364493 95 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 NDUFS5P1-201ENST00000405668 289 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AL365496.1-201ENST00000426885 215 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 GTF2IP20-201ENST00000431663 360 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AC093156.1-201ENST00000440382 670 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 USP9YP15-201ENST00000442391 422 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AL022238.1-201ENST00000442557 355 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 RNU7-23P-201ENST00000459465 62 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 AC133134.1-201ENST00000466800 359 ntBASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC71LQ8N9Z2 SRIP1-201ENST00000489235 288 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms