Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MRPL55Q7Z7F7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNU1-35P-201ENST00000362782 153 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNY4P16-201ENST00000364768 94 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 SNORA4.3-201ENST00000365564 137 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNU5E-6P-201ENST00000365574 115 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-748P-201ENST00000384648 107 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 MIR512-1-201ENST00000384913 84 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-584P-201ENST00000410350 95 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RPS15AP9-201ENST00000439856 381 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RPL21P41-201ENST00000459863 264 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RN7SL432P-201ENST00000484057 298 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL358832.1-201ENST00000497800 389 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AF213884.2-201ENST00000510417 903 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC074250.1-201ENST00000511117 192 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 SMURF2P1-201ENST00000514992 481 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-572P-201ENST00000516724 80 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 ACA59.2-201ENST00000517061 156 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 IGLV3-17-201ENST00000519099 244 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 MIR5694-201ENST00000581190 76 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.6-201ENST00000603753 252 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL645944.1-201ENST00000603857 493 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.11-201ENST00000604059 253 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC008162.1-201ENST00000604718 254 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.1-201ENST00000604752 252 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.5-201ENST00000605253 252 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.12-201ENST00000605291 253 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.8-201ENST00000605353 252 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL670379.7-201ENST00000605823 252 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AL589994.2-201ENST00000621124 579 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC026422.1-201ENST00000623961 452 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC138627.2-201ENST00000624202 601 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 AC000403.1-201ENST00000613696 3585 ntBASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
MRPL55Q7Z7F7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-898P-201ENST00000365627 104 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-851P-201ENST00000384565 107 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 RNVU1-14-201ENST00000384770 164 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR34B-201ENST00000385076 84 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR670-201ENST00000390142 98 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNORD23.1-201ENST00000408212 104 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AL512649.1-201ENST00000428997 581 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MYL8P-204ENST00000431574 518 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AL591704.1-201ENST00000432574 275 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SDR42E1P3-201ENST00000438345 502 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 PGBD4P3-201ENST00000440731 581 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNORD97-201ENST00000459187 142 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 FTH1P2-201ENST00000466086 412 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC090525.1-201ENST00000479116 478 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 RN7SL504P-201ENST00000494496 287 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 GTF2IP9-201ENST00000502460 301 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC034244.1-201ENST00000507687 207 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MRPS33P3-201ENST00000513456 322 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNORA9.3-201ENST00000516383 129 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SNORA31.19-201ENST00000517079 126 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC009812.2-201ENST00000517657 457 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 PSMA2P1-201ENST00000526365 646 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms