Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RPS25P9-201ENST00000435591 252 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC124916.1-201ENST00000444020 547 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC080013.2-201ENST00000460866 323 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC010631.1-201ENST00000474150 156 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 RN7SL636P-201ENST00000497504 294 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 RN7SKP258-201ENST00000517151 304 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AP000889.2-201ENST00000532684 490 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC093012.1-202ENST00000549403 582 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL133241.1-201ENST00000556832 487 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL133153.1-201ENST00000557756 303 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL138976.2-201ENST00000563989 694 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC105245.1-201ENST00000581934 244 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AP001269.3-201ENST00000588718 329 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 BNIP3P27-201ENST00000599991 412 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AL596327.1-201ENST00000603629 213 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC004908.2-201ENST00000609090 574 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 DUSP12P1-201ENST00000612874 516 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC006386.1-201ENST00000619436 415 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 AP002791.1-201ENST00000623291 381 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC007490.1-201ENST00000624321 703 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC004808.1-201ENST00000627671 721 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 AC097655.1-201ENST00000635075 318 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SCXQ7RTU7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCXQ7RTU7 ZNF658B-202ENST00000615961 3375 ntBASIC1.57□□□□□ -2.16
SCXQ7RTU7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCXQ7RTU7 HSPA8P4-201ENST00000511877 1920 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCXQ7RTU7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 RNU6-853P-201ENST00000364306 107 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL359511.1-201ENST00000402970 211 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL139397.2-201ENST00000404529 772 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RN7SKP192-201ENST00000411291 327 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RNA5SP270-201ENST00000411361 118 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RPL21P24-201ENST00000413752 448 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL135786.1-201ENST00000415892 214 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RPS3AP37-201ENST00000419176 745 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC010153.1-201ENST00000432862 727 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RSU1P2-202ENST00000437884 485 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RPS12P2-201ENST00000439728 269 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 EEF1A1P39-201ENST00000440791 250 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 GPM6BP3-201ENST00000442797 145 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 CECR9-201ENST00000453421 199 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCXQ7RTU7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 GTF2IP9-201ENST00000502460 301 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC093809.1-201ENST00000509155 340 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC116353.3-201ENST00000511215 249 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RNU1-41P-201ENST00000516161 162 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 RNU1-48P-201ENST00000516400 162 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC021269.2-201ENST00000532318 330 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 MTCO2P15-201ENST00000532655 656 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 YWHAZP1-201ENST00000556286 722 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC005261.5-201ENST00000596280 355 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC021171.1-201ENST00000603137 706 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AP001486.3-201ENST00000615334 372 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AP002371.2-201ENST00000624450 503 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL138960.2-201ENST00000625145 535 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 PISRT1-201ENST00000626175 531 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 MIR3199-2-201ENST00000636243 86 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.56□□□□□ -2.16
SCXQ7RTU7 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
SCXQ7RTU7 MTND5P30-201ENST00000452896 1731 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 SNORD116.1-201ENST00000365628 92 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 Y_RNA.465-201ENST00000384293 102 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL359634.1-202ENST00000404721 284 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 MIR320C1-201ENST00000408566 88 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNA5SP425-201ENST00000410336 112 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNU2-68P-201ENST00000410878 191 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 Z98742.3-201ENST00000418637 326 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC083875.1-201ENST00000419509 405 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 ISCA1P1-201ENST00000426679 387 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms