Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL021997.1-201ENST00000605757 193 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AL050343.2-201ENST00000607338 280 ntBASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CCDC171Q6TFL3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 MIR1276-201ENST00000408707 83 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 OR51A5P-201ENST00000415429 942 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AC092685.1-201ENST00000447960 1243 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 HMGN1P7-201ENST00000491722 313 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 LTV1P1-201ENST00000510683 1237 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AP004247.1-201ENST00000531556 1289 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AL391261.3-201ENST00000557194 520 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AC115989.2-201ENST00000578640 563 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AC068276.1-201ENST00000605793 379 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AL592148.2-201ENST00000612210 372 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 AL049641.1-201ENST00000441055 1948 ntBASIC1.4□□□□□ -2.18
CCDC171Q6TFL3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 RNU6-707P-201ENST00000364647 95 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 RNU2-41P-201ENST00000410991 178 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 AL365400.1-201ENST00000431854 640 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 HMGN2P18-201ENST00000450680 270 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 RPL31P58-201ENST00000469001 379 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 RNA5SP102-201ENST00000516865 106 ntBASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.4□□□□□ -2.19
CCDC171Q6TFL3 AC023141.4-201ENST00000412031 328 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 EDDM3CP-201ENST00000415977 425 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AL590383.1-201ENST00000428602 75 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 RAC1P7-201ENST00000445367 377 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 MIR3126-201ENST00000577443 74 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC008121.1-201ENST00000603244 268 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AL078605.1-201ENST00000603529 500 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC090132.2-201ENST00000615881 347 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC090772.4-201ENST00000623599 362 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 AC017104.5-201ENST00000637647 639 ntBASIC1.39□□□□□ -2.19
CCDC171Q6TFL3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 RNU6-921P-201ENST00000384361 107 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 MIR1285-1-201ENST00000408593 84 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 RPS12P24-201ENST00000412619 387 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 PABPC1P3-201ENST00000469174 459 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC008526.1-201ENST00000509149 338 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 RNU6-27P-201ENST00000516146 107 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 HAUS1P3-201ENST00000523909 662 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 HMGN2P15-201ENST00000585707 270 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 AC097655.1-201ENST00000635075 318 ntBASIC1.38□□□□□ -2.19
CCDC171Q6TFL3 MTND5P35-201ENST00000557537 1720 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 RNU6-891P-201ENST00000384280 111 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AL591704.2-201ENST00000421658 181 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 NDUFB4P7-201ENST00000423198 363 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC024082.2-201ENST00000434771 238 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 SNRPGP9-201ENST00000456025 225 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC093852.1-201ENST00000503587 266 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC015688.2-201ENST00000584523 262 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC013553.2-201ENST00000604244 589 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC069294.1-201ENST00000608397 350 ntBASIC1.37□□□□□ -2.19
CCDC171Q6TFL3 AC008498.1-201ENST00000613012 531 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms