Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RNU6-289P-201ENST00000364093 107 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RNU6-777P-201ENST00000364265 104 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RN7SKP192-201ENST00000411291 327 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 USP9YP33-201ENST00000412220 421 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 MTATP6P27-201ENST00000416987 621 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 BX119904.4-201ENST00000424402 301 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 ZYG11AP1-201ENST00000430329 837 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 USP9YP35-201ENST00000435696 412 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AL117351.1-201ENST00000438864 766 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 SDCBPP1-201ENST00000440192 890 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC002381.1-201ENST00000447049 280 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 SUMO2P2-201ENST00000456482 255 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RPL7P18-201ENST00000478965 734 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 LARP1BP2-201ENST00000486594 519 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC105252.1-201ENST00000503089 286 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC114981.1-201ENST00000503897 678 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RNU6-311P-201ENST00000516224 102 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 RNU6-1282P-201ENST00000516735 96 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 SNORA31.22-201ENST00000517204 135 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 HSPA8P13-201ENST00000523715 472 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 MTND4P33-201ENST00000556706 766 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 MIR1273D-201ENST00000577266 86 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 MIR4760-201ENST00000585040 80 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AC004853.1-201ENST00000604902 698 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 TUG1_1.1-201ENST00000610654 145 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AL049641.1-201ENST00000441055 1948 ntBASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SMARCD3Q6STE5 AL079343.1-201ENST00000572358 1771 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 RNU6-28P-201ENST00000362378 107 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 RNU5A-1-201ENST00000362698 116 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 SNORA67.3-201ENST00000384366 140 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 SNORA64-201ENST00000384674 134 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 RSL24D1P4-201ENST00000400938 484 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 HMGB1P17-201ENST00000403495 628 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 RNA5SP425-201ENST00000410336 112 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 RNA5SP270-201ENST00000411361 118 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MTND5P14-201ENST00000441481 1267 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MTND1P31-201ENST00000449206 961 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AL049874.1-201ENST00000489560 388 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC008549.1-201ENST00000512900 643 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MRPS36P3-201ENST00000519284 130 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 OR5AQ1P-201ENST00000527596 927 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AC245297.2-201ENST00000610119 565 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 SDR42E1P2-201ENST00000614861 481 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 AL136981.2-201ENST00000617319 734 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 MIR219B-201ENST00000637023 88 ntBASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMARCD3Q6STE5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
SMARCD3Q6STE5 AL390862.1-201ENST00000635467 1469 ntBASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 RNU6-157P-201ENST00000383957 107 ntBASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 AL356131.1-201ENST00000405826 414 ntBASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 SNORA3.2-201ENST00000408221 125 ntBASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 RNU6-1328P-201ENST00000410938 106 ntBASIC1.77□□□□□ -2.13
SMARCD3Q6STE5 PIGPP2-201ENST00000411569 458 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms