Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 RNU6-272P-201ENST00000411028 104 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 RPL30P4-201ENST00000429309 333 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AL512844.2-201ENST00000433990 593 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 USP9YP35-201ENST00000435696 412 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 RPS27P1-201ENST00000450552 247 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 SNRPFP4-201ENST00000456366 242 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AC104057.1-201ENST00000515547 497 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 SNORA31.6-201ENST00000516241 130 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AC079148.1-201ENST00000565944 819 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.76□□□□□ -2.29
HMGN3Q15651 AC104763.2-201ENST00000604179 382 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AP003973.1-201ENST00000604639 691 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AC123912.5-201ENST00000605470 343 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 AC073968.1-201ENST00000618594 637 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 Y_RNA.327-201ENST00000365201 102 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
HMGN3Q15651 RPL37P10-201ENST00000412884 288 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.75□□□□□ -2.29
HMGN3Q15651 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 MICF-203ENST00000432679 129 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC080013.2-201ENST00000460866 323 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC112198.4-201ENST00000515450 351 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 SNORA44.1-201ENST00000517031 108 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC034114.1-201ENST00000520293 285 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGN3Q15651 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGN3Q15651 AC110792.4-201ENST00000609843 298 ntBASIC0.75□□□□□ -2.29
HMGN3Q15651 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
HMGN3Q15651 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN3Q15651 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.74□□□□□ -2.29
HMGN3Q15651 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
HMGN3Q15651 MIR532-201ENST00000385025 91 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 MIR30A-201ENST00000385092 71 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN3Q15651 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.74□□□□□ -2.29
HMGN3Q15651 Z82205.1-201ENST00000428456 297 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.74□□□□□ -2.29
HMGN3Q15651 CR769776.1-201ENST00000441254 787 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN3Q15651 AC104164.3-201ENST00000467363 1258 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 COX6CP14-201ENST00000469580 174 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AL163540.1-201ENST00000485382 386 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 RPS3AP22-201ENST00000488297 769 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC114786.4-201ENST00000508771 728 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC114797.1-201ENST00000514003 728 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN3Q15651 SNORA4.4-201ENST00000515921 135 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN3Q15651 AL391261.3-201ENST00000557194 520 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC105245.1-201ENST00000581934 244 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC098848.2-201ENST00000588023 330 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC013553.2-201ENST00000604244 589 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 snoU13.31-201ENST00000607291 104 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AC008443.7-201ENST00000622195 246 ntBASIC0.74□□□□□ -2.29
HMGN3Q15651 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN3Q15651 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HMGN3Q15651 RNA5SP465-201ENST00000391195 109 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 RN7SKP61-201ENST00000410642 295 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.73□□□□□ -2.29
HMGN3Q15651 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.73□□□□□ -2.29
HMGN3Q15651 AC098591.2-201ENST00000510152 315 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AC093677.1-201ENST00000514414 678 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 HAUS1P3-201ENST00000523909 662 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AC135279.1-201ENST00000543493 504 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.73□□□□□ -2.29
HMGN3Q15651 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN3Q15651 AC023825.1-201ENST00000566704 1030 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.6-201ENST00000603753 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.11-201ENST00000604059 253 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.10-201ENST00000604330 253 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AC008162.1-201ENST00000604718 254 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.1-201ENST00000604752 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.2-201ENST00000604983 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.5-201ENST00000605253 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.4-201ENST00000605279 254 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.12-201ENST00000605291 253 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.8-201ENST00000605353 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.9-201ENST00000605428 253 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AL670379.7-201ENST00000605823 252 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 MIR6715A-201ENST00000615929 79 ntBASIC0.73□□□□□ -2.29
HMGN3Q15651 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN3Q15651 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
HMGN3Q15651 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
HMGN3Q15651 RNU1-22P-201ENST00000363334 158 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN3Q15651 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN3Q15651 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
HMGN3Q15651 AC012497.1-201ENST00000429392 575 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AL592045.1-201ENST00000429867 352 ntBASIC0.72□□□□□ -2.29
HMGN3Q15651 AC245047.4-201ENST00000433189 144 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms