Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 HMGN2P15-201ENST00000585707 270 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 NRBF2P5-201ENST00000603087 788 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 MTND4LP5-201ENST00000605152 292 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 AL136363.1-201ENST00000605349 337 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 AC026790.2-201ENST00000606282 430 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 MIR7844-201ENST00000616161 122 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 AC104010.1-201ENST00000616889 150 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 AC068057.2-201ENST00000624047 895 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.29□□□□□ -1.88
CALD1Q05682 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CALD1Q05682 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CALD1Q05682 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CALD1Q05682 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CALD1Q05682 RNA5SP139-201ENST00000364340 117 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.28□□□□□ -1.88
CALD1Q05682 DEFA7P-201ENST00000382676 285 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 NDUFS5P1-201ENST00000405668 289 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RNU6-920P-201ENST00000410926 92 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CALD1Q05682 ELOCP17-201ENST00000414751 326 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.28□□□□□ -1.88
CALD1Q05682 USP9YP13-201ENST00000417797 480 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RPL7P37-201ENST00000425095 738 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.28□□□□□ -1.88
CALD1Q05682 AL133217.1-201ENST00000450980 425 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CALD1Q05682 RPS27P26-201ENST00000494583 239 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.28□□□□□ -1.88
CALD1Q05682 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.28□□□□□ -1.88
CALD1Q05682 RNA5SP320-201ENST00000516263 124 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 SNORA31.11-201ENST00000516528 139 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RNU6-201P-201ENST00000517100 61 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RN7SKP258-201ENST00000517151 304 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.28□□□□□ -1.88
CALD1Q05682 AC107934.1-201ENST00000522215 217 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.28□□□□□ -1.88
CALD1Q05682 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 RPL23AP78-201ENST00000599928 470 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 KC877982.1-201ENST00000602313 470 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 AP000860.1-201ENST00000605250 559 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 FTX_3.1-201ENST00000610451 147 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 AF246928.1-201ENST00000623768 87 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 Z82195.2-201ENST00000612348 18351 ntBASIC3.28□□□□□ -1.88
CALD1Q05682 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CALD1Q05682 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CALD1Q05682 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.27□□□□□ -1.89
CALD1Q05682 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.27□□□□□ -1.89
CALD1Q05682 RNU6-553P-201ENST00000364047 96 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CALD1Q05682 AC009414.1-201ENST00000427200 443 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.27□□□□□ -1.89
CALD1Q05682 RNU7-23P-201ENST00000459465 62 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 RNA5SP82-201ENST00000516707 92 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.27□□□□□ -1.89
CALD1Q05682 AC128657.1-201ENST00000549459 145 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 MIR5697-201ENST00000578045 78 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.27□□□□□ -1.89
CALD1Q05682 MIR5194-201ENST00000582634 120 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.27□□□□□ -1.89
CALD1Q05682 AC008739.2-201ENST00000597006 317 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 WISP1-OT1-201ENST00000602893 642 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CALD1Q05682 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.27□□□□□ -1.89
CALD1Q05682 AC010149.2-201ENST00000637608 315 ntBASIC3.27□□□□□ -1.89
CALD1Q05682 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.27□□□□□ -1.89
CALD1Q05682 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CALD1Q05682 RNU6-1284P-201ENST00000363701 100 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 RNU6-884P-201ENST00000363889 107 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 Y_RNA.245-201ENST00000364493 95 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 RNU6-1180P-201ENST00000364935 107 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 HMGN2P30-201ENST00000423237 256 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 MTND4P20-201ENST00000424125 869 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AL365496.1-201ENST00000426885 215 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
CALD1Q05682 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.26□□□□□ -1.89
CALD1Q05682 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC104389.3-201ENST00000445629 235 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AL590365.1-201ENST00000450788 243 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AC092798.1-201ENST00000458542 409 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 RPL30P6-201ENST00000475925 342 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 RPF2P2-201ENST00000504693 896 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 SUMO2P6-201ENST00000505273 288 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC087373.1-201ENST00000524920 491 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 OR5BN1P-201ENST00000532955 829 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.26□□□□□ -1.89
CALD1Q05682 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.26□□□□□ -1.89
CALD1Q05682 AC027807.2-201ENST00000616099 408 ntBASIC3.26□□□□□ -1.89
CALD1Q05682 AC006338.1-201ENST00000618453 749 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms